Geminocystis sp. NIES-3709: GM3709_1635
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Entry
GM3709_1635 CDS
T04142
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gen03400
]
GM3709_1635
DNA repair and recombination proteins [BR:
gen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM3709_1635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
Lon_C
AAA
AAA_16
NTPase_1
ATPase_2
ABC_tran
AAA_14
nSTAND3
PIN-TPR-GreABC
DUF7125
PAXNEB
AAA_24
GvpD_P-loop
divDNAB
MCM
DUF7129
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BAQ64870
UniProt:
A0A0D6AQD2
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Position
1813201..1814685
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AA seq
494 aa
AA seq
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MGKTRTVYICNACGAESSQWFGKCPSCGVYGTLEEEISNNNNNSNGNFSRAGWQSQNRSQ
AKKETPAQPRISVKFSDITEEEQPRMNSGYQELDRVLGGGIVPGSLVLIGGDPGIGKSTL
LLQTANQLAIRFPRILYVSAEESGQQVKLRASRLGVGLIKDNLTNGNQNLSIETNLYILP
ETDLEEILRELESLKPQVAIIDSIQTLHLSTLNSAPGSVSQVRECTSALMQVAKRESITL
FIVGHVTKEGAIAGPRVLEHLVDTVLYFEGDRYASHRLLRSVKNRFGATHEIGIFEMVDH
GLDEVTNPSELFLSNRDEQAPGTATIVSCEGTRSIVVELQALVSPTSYTSPRRSTTGVDY
NRLQQILAVLEKRVGIPLSKLDAYVASAGGLAVEEPAADLGMAIAIVASFRDRVVDARTV
LIGEIGLGGQVRLVSQMELRLKEAAKLGFKRAIVPKGQTYPSDLGLEIICVSKVIQAIVV
AIPTNQTDEEEPES
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaccagaactgtttatatctgtaatgcttgtggtgcagaatcatctcagtgg
tttggtaaatgccctagttgtggtgtgtacggtactttagaagaagaaatttctaataac
aataataatagtaatggtaattttagccgtgccggttggcaatctcaaaatcgtagccaa
gcaaaaaaagaaacccctgcacaacctcgaatttctgtaaaattttctgatattacagaa
gaagaacagccccgtatgaattctggttatcaagaattagatcgagttttaggtggagga
atcgttccgggttcattagtactcataggaggagatccgggtattggtaaatcaacttta
ttgttacaaacagctaatcaattagcaatacgttttcctcgtattttgtatgtttccgcc
gaagaatctgggcaacaggtcaaattaagggcttctcgtttaggagtaggattgataaaa
gataatttgactaatggtaatcaaaatctctcgatcgaaactaacttatatattttaccc
gaaacggatttagaagaaatattgcgagagttagaatctctaaaacctcaagttgccatt
attgacagtattcaaaccctacatctttccactcttaattctgctcccggttcagtttct
caagtaagagaatgtacttctgctttgatgcaagtagccaaacgagaaagtattactcta
tttatagtcggtcatgttacaaaagaaggtgcgattgcagggcctagggtattagagcat
ttagtcgatacagtattatattttgaaggcgatcgatatgcttcccatcgtttgttaaga
tctgtaaaaaatcgttttggtgctacccatgaaattggtatttttgaaatggtagatcac
ggtttagatgaagtgacgaacccttcagaactctttttaagtaaccgagatgaacaagca
cccggtacagctacgattgtctcttgtgaaggtactagatcgatcgtagtggaattacaa
gccttagttagtcctaccagttacacttctcctcgtcgatcgactacaggcgttgattat
aatagactacaacaaattttagcagtattagaaaaaagagtcggtattcctctgtcaaaa
ttagatgcttatgtagcgtcggctggaggtttggccgtagaagagccggccgcagattta
ggtatggcaattgccattgtcgctagttttcgcgatcgagtagtcgatgctcgtacagta
ttaatcggagaaatcggattaggaggacaagtgcgtttagtatcgcaaatggagctaaga
ttaaaagaagcggcgaaattaggctttaaacgggcgatcgtgcctaaaggtcaaacttat
cctagtgatttaggcttagaaatcatctgtgtcagtaaagtaattcaagcgatcgtagtt
gcaattcctacaaatcaaaccgatgaagaagagccagaatcttaa
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