Geminocystis sp. NIES-3709: GM3709_2212
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Entry
GM3709_2212 CDS
T04142
Name
(GenBank) nitrogen assimilation transcriptional activator NtcB
KO
K09681
LysR family transcriptional regulator, transcription activator of glutamate synthase operon
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gen03000
]
GM3709_2212
Transcription factors [BR:
gen03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GM3709_2212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
MarR_2
HTH_20
HTH_DeoR
HTH_36
HTH_28
LacI
PilJ
MerR
Motif
Other DBs
NCBI-ProteinID:
BAQ65447
UniProt:
A0A0D6ARG1
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Position
complement(2545589..2546548)
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AA seq
319 aa
AA seq
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MRIEQIKAFLAVSETGSFGQAAKLCGVTQSTISRQIQGLEDHLKTPLFHRQAQAKLTVTG
EKILPHARRICQEWEKVEEKIQELLGGEQTELCVAAIHSVCAYYLPPILQNFCHNHPQVQ
LRVTALGSDRALKVLRDGLVDVALVMNNKYLTSSSEMIVKHLYHEAIKVLTSSTHPLANQ
KNVTINDLAQYSQVIFKDGYGMQRIVQDIFSSQGLDLEVAMELNTLDAFRGVIRQGNLIA
LLPELALNESLTDPSLAIIPIDMGSNNYHNSQLTREVVLITTKDRLQIPTVRDFFNLVYD
FSLDRKKTHTEILNEVYKK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgagcaaatcaaggcttttttagcggtaagcgaaaccggaagttttggacaa
gcggcaaaattgtgtggcgtaacacaatcaactattagccgtcagattcaaggtttagaa
gatcatctaaaaacccccttatttcatcgtcaagcccaagctaaattaactgtaacggga
gagaaaatcctaccccatgctagacgtatttgtcaggagtgggaaaaagtagaagaaaaa
atccaagagttgttaggtggtgaacaaactgaactttgtgttgccgctatccattccgtg
tgtgcttattatttaccaccaattttacaaaatttttgtcataatcaccctcaagtacaa
ttacgagtgactgctttaggtagcgatcgagctttgaaagtattgagagatggtttggta
gatgtggctttggtgatgaataataaatatctcacatctagttcagaaatgatcgttaaa
catttataccatgaagccattaaagttttaacatcaagtactcaccctttagctaatcaa
aaaaatgtcaccattaacgatttagcacaatattctcaagttatttttaaagatggatat
ggaatgcagagaattgttcaagatatattctccagtcagggattagacttagaagtggcg
atggaattaaatactttagatgcttttaggggtgtcatccgacaaggtaatttaatcgct
ttattaccagaattagcgttaaatgagtctctcacagatcccagtttagccattattcct
attgatatgggttcaaataattatcataatagtcaattaaccagagaagttgtgttaatt
accactaaagatcgtttacaaattcccacagtacgagatttttttaatcttgtttatgat
tttagtctcgatcgtaaaaaaacccatactgaaatcttaaatgaagtatataaaaaataa
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