Geminocystis sp. NIES-3709: GM3709_254
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Entry
GM3709_254 CDS
T04142
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen03420
Nucleotide excision repair
gen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GM3709_254
03430 Mismatch repair
GM3709_254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gen03400
]
GM3709_254
Enzymes [BR:
gen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM3709_254
DNA repair and recombination proteins [BR:
gen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM3709_254
MMR (mismatch excision repair)
Other MMR factors
GM3709_254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
CCM2_C
DEAD
MecA_N
Motif
Other DBs
NCBI-ProteinID:
BAQ63489
UniProt:
A0A0D6ALZ5
LinkDB
All DBs
Position
307693..309999
Genome browser
AA seq
768 aa
AA seq
DB search
MVDDKIDRDLKNKILSLVANLREGQKQLALWKGGKMAVSAVPGAGKSHGLATAAAITIAK
NKLHSNRQLIIVTYTRSATASIEKKVKEILTQELKLLPVGFSVQTIHSLAVNIANRYPQL
SQLEMENRTLTDINSSHPLIFDTVNQWVKNHPELYELLLKGEKSLSDDESELLQRESILL
NDILPKVAYNAISIIKSSDLTLNDSFYLPNNLSNPYPLMTIAKGLYEEYQELMIKQQRID
YDDLILSALRVLKHDRAREILQEEVFAVFEDEAQDSSPLQEKLLEILATDTQNNQTNFVR
VGDSNQAINSTFTSADPKYFRDFCHQCQENNSFYTMNQAGRSCQIIIDTANKTLTWVNNK
IKAELVNKKVDDISSLIPFENQEIKPVIIAENSTNINPQSEGKGLEIEYPKDIYQTVDLI
KAKIIKLWDKKNKEKLENFAILVRENKQGKFLYDYLKDLEKTHNLKVKLISDTDSYAKIP
QEILSLLQFLDSPHSSQYLRKTLEIVTERLNLNLEDITSLSIYPEKFLYPTLIDCPQNEQ
VIKIKNECIKLLQARLELAPYQLIIFLSLALKYDQLELATVQKLNERIKQEIKTNISLKS
IIDTLKAIVNGEKFKGVEIEDEKSYQKEGQLTIITMHKAKGLEWDYVFLPFLHENIIPGN
GEGYMPKNASFIGKFNLADVTRSILRSIVHHDKLDQKEMSIDEASLENNYQKKAEEYRLL
YVAMTRAKKLLWMSSAKKAPWRWGFFEDNGNKSQLQDQAPCPVIIALS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgataaaatcgatcgagatttaaaaaataaaatactgtctttagtagcaaat
ttaagagaaggacaaaaacaactagccctgtggaaaggtggtaaaatggcagtgtctgcc
gtgccaggggcgggaaaatctcatggtttagcgacggcggcggctataactatcgctaaa
aataaactccacagtaatcgacagttaattattgtaacctatactcgatcggcaactgcc
agtatcgaaaaaaaagtcaaggaaatactcacacaagaattaaaattgcttccggttggc
ttcagtgtgcaaaccatccacagtttagcggtgaatatagctaatcgctatcctcaatta
tctcaattagaaatggaaaatcgtactttaacggatataaattctagtcatccgctcatt
tttgatactgtaaatcaatgggtaaaaaatcatcctgaattgtatgaattattgttaaaa
ggtgaaaaaagtttaagtgatgacgaaagcgaactattacaacgagagtctattttatta
aatgatatattgccaaaagtagcttataatgctatatctattattaaaagttcggattta
actctcaatgattctttttatttacctaataatctcagtaatccttatccattgatgaca
attgccaaagggttatatgaagaatatcaggagttgatgataaaacaacaaaggatagat
tatgatgatctcattttatctgctttaagggtattaaaacacgatcgagccagagaaatt
ttacaagaagaagtctttgctgtatttgaagacgaggcacaagattctagcccgttacaa
gaaaaattactggaaattttagcaacagatactcaaaataatcaaactaattttgtcaga
gtgggtgattctaatcaagcaataaattccacatttacttctgctgatcctaaatacttt
cgtgatttttgtcatcaatgtcaagaaaataatagtttttatactatgaatcaagcagga
agaagttgtcaaattattattgatactgccaataaaactttaacatgggttaataataaa
ataaaagcagaattagttaataaaaaagttgatgatatatcgtccttaattccttttgaa
aatcaagagataaaacctgttataattgctgaaaattcaactaatattaatccacaatct
gaagggaaaggacttgagattgaatatccaaaagatatttatcaaaccgtagatttaata
aaagcaaaaattattaaattatgggataaaaaaaataaggaaaaactagaaaattttgct
atcttagttagagaaaataaacaaggaaagtttttatatgattatttaaaagacttagaa
aaaactcataatcttaaagttaaattaatcagtgatactgatagttatgcaaagattcct
caagaaattttatctcttttacaattcttagactctcctcattcttctcaatatcttaga
aaaactttagaaatagtcacggaaaggttaaacttaaatcttgaagatataacctcttta
agcatttatcctgaaaaatttttatatccgactttgatagattgtcctcaaaatgagcag
gtaattaaaataaaaaatgaatgtataaaattgttacaagctcgtttagaattagcacct
tatcaattaattatttttctttccttagctttaaaatatgatcaattagaattagctacg
gtacaaaaattaaacgaaagaatcaaacaagaaatcaaaacaaatatttccttaaaatct
atcattgataccttaaaagcaatagttaatggtgaaaaatttaagggagtagaaatagaa
gacgaaaagagttatcaaaaagaaggacaattgactattattacaatgcacaaggcaaaa
ggcttagaatgggattatgtttttttaccttttttgcatgaaaatattatcccaggaaat
ggtgaaggatatatgccaaaaaatgctagttttatcggaaaatttaacttagctgatgtc
actcgatcgatattaagatctattgttcatcatgataaattagatcaaaaagaaatgtca
atagatgaggcatctttagaaaataattatcagaaaaaagcagaagaatatcgtttatta
tatgtagcaatgacaagggcaaaaaaattattatggatgtcatcagcaaaaaaagcacct
tggcgatggggtttttttgaagataatggtaataaatctcaattgcaagatcaagctcct
tgtcctgttattatagcccttagttaa
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