Geminocystis sp. NIES-3709: GM3709_2832
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Entry
GM3709_2832 CDS
T04142
Name
(GenBank) DNA polymerase III delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen03030
DNA replication
gen03430
Mismatch repair
gen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM3709_2832
03430 Mismatch repair
GM3709_2832
03440 Homologous recombination
GM3709_2832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gen03032
]
GM3709_2832
03400 DNA repair and recombination proteins [BR:
gen03400
]
GM3709_2832
Enzymes [BR:
gen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM3709_2832
DNA replication proteins [BR:
gen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM3709_2832
DNA repair and recombination proteins [BR:
gen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM3709_2832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DUF5886
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAQ66067
LinkDB
All DBs
Position
3186325..3187275
Genome browser
AA seq
316 aa
AA seq
DB search
MKPLAKLIGQPLAVELLERAISVDRIAPAYLFVGAKGVGKAFAARCFTEMLMIKTTDNYV
SASKKLDEGNHPDFLWVEPTYNDKGTLLTDKEATEKGLKRKTAPKIRIEQIREISQFLAR
PPLKSDRSIVVIESAELMAESAGNALLKTLEEPGQATIILIAPSIDSILSTLVSRCQIIP
FSRLSEEHLKLVLYRQNVAEVLDYPQLITMCQGCPGKAIDDWQKLKEISSELLLKLTKLP
NNVIDGLILAKEITKEIDLENQIWLADYLQYLYWDKYRKVKLIESLEKVKKTLIRYVQPR
LVWDCFFLDCQDITML
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctttggctaaattaatcgggcaacctcttgcggtggaattattagaacgtgcg
atctctgtcgatcgtattgcaccagcttacttatttgtaggagcaaagggcgttgggaaa
gcttttgccgcaaggtgttttacagaaatgttaatgattaaaaccacagataattatgtt
tctgcttccaaaaaattagacgaaggaaatcaccctgattttttatgggttgaaccaact
tacaatgataaaggaacattattaacagataaagaagcaacagaaaaaggattaaaacgt
aaaacagcaccaaaaattagaatcgaacaaattagagaaattagtcaatttttagcaagg
cctcctttaaaatctgatcgctcgatcgtggtgatagaatcagcagaattaatggcagaa
tcggcaggaaatgctttattaaaaaccttagaagaaccgggacaagctactattatttta
attgcacctagcattgattctatcttatcaacattagtttctcggtgtcaaattattcct
ttttctcgtcttagtgaagaacatttaaaattagttttatatcgtcaaaatgttgcagaa
gttttagattatcctcaactaataacaatgtgtcaaggatgtccgggaaaagcgatcgat
gactggcaaaaacttaaagaaatatcatcagaattgctattaaaattaactaagttaccg
aataatgtgatagatggcttaattttggcaaaagaaattacgaaagaaatagatttagaa
aatcaaatttggttagcggattatctacaatatctttactgggataaataccgaaaagtt
aaattaattgaaagtttagaaaaagtaaaaaaaactttaattcgttatgtgcaacctcgt
ttagtatgggattgttttttcttagattgtcaagatataaccatgctttaa
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