Geminocystis sp. NIES-3709: GM3709_2893
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Entry
GM3709_2893 CDS
T04142
Name
(GenBank) heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM3709_2893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gen03019
]
GM3709_2893
03110 Chaperones and folding catalysts [BR:
gen03110
]
GM3709_2893
03029 Mitochondrial biogenesis [BR:
gen03029
]
GM3709_2893
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gen04147
]
GM3709_2893
Enzymes [BR:
gen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GM3709_2893
Messenger RNA biogenesis [BR:
gen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GM3709_2893
Chaperones and folding catalysts [BR:
gen03110
]
Heat shock proteins
HSP60 / Chaperonin
GM3709_2893
Mitochondrial biogenesis [BR:
gen03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GM3709_2893
Exosome [BR:
gen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GM3709_2893
Exosomal proteins of other body fluids (saliva and urine)
GM3709_2893
Exosomal proteins of breast cancer cells
GM3709_2893
Exosomal proteins of colorectal cancer cells
GM3709_2893
Exosomal proteins of bladder cancer cells
GM3709_2893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
BAQ66128
UniProt:
A0A0D6AT97
LinkDB
All DBs
Position
complement(3245702..3247327)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKSIIYNEEARRALEKGIDLLAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAHAIVKEGLRNVAAGANPIALKRGID
KATEHLVEKIASHSKKVEDSKAIAQVGTISAGNDTEVGDMIAKAMEKVGQEGVISLEEGK
SMETELEITEGMRFDKGYISPYFVTDTERMEAVFEDPFILITDKKITLVQDLVPVLEQVA
RQGKPLIIIAEDIEKEALATLVVNRLRGVLNVAAIKAPGFGDRRKQMLEDIAILTGGQMI
SEDAGLRLDTTTVDQLGSARRISITKDSTTIVAEGNEKEVKTRCDQIRRQIEESDSSYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APELEAWATANLSAEQLTGALIVARALTAPLKRIAENAGQNGAVVAERVKEKDFNTGYDA
SNNEYVDMFAAGIVDPAKVTRSAIQNAASIAGMVLTTECIIVDKPEKDKAPAPAGGGDFD
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaattatttacaacgaagaagcccgtcgtgccctagaaaaagggattgac
ttattagctgaagcagtagctgttactcttggtcctaaaggacgtaacgtagtattagag
aaaaaatttggtgctcctcaaattgttaatgacggtgtaaccatcgctaaagaaatcgaa
ttagaagatcacatcgaaaatactggagttgctttaattcgtcaagcggcttctaaaacc
aacgatgtggctggtgacggaactaccaccgctactgtattagctcatgcgatcgtcaaa
gaaggcttacgcaacgtggctgctggtgctaaccccatagctctcaagcgtggtatcgac
aaagctaccgagcatttagtagaaaaaattgcgagtcattccaaaaaagtagaagacagc
aaagctattgctcaagtgggtactatctccgcaggtaacgataccgaagtgggtgatatg
attgccaaagcgatggaaaaagtagggcaagaaggcgttatctccctcgaggaaggtaaa
tctatggaaaccgaactcgaaatcaccgaagggatgcgtttcgataagggttatatttct
ccttacttcgtaactgataccgaacgtatggaagcagtatttgaagatcctttcatctta
attactgacaaaaaaattaccttagttcaagatttagtacctgttttagaacaagttgct
cgtcaaggcaaacctttaatcatcattgctgaagacatcgaaaaagaagctcttgcaacc
ttagttgttaaccgtcttcgtggcgtgttaaacgttgcagctattaaagctcccggattt
ggcgatcgtcgtaaacagatgttagaagacattgctattttaactggtggacaaatgatc
agtgaagatgctggtttaagacttgataccaccactgtagatcaattaggttctgctcgt
cgtattagtatcacgaaagatagcaccacgatcgtcgcagaaggtaacgagaaagaagtt
aaaacccgttgtgatcaaattcgccgtcaaatcgaagaatctgattcttcctacgacaaa
gaaaaattacaagagcgtttagctaaattaagcggtggcgttgcggtaattaaagttggt
gcggctaccgaaactgaaatgaaagatcgtaagttacgcttagaagatgccatcaacgcc
actaaagcagctgtagaagaaggtatcgttccaggtggtggtacaaccctagcacactta
gctcctgaattggaagcatgggcaactgctaacctctctgctgaacagttaactggtgct
ttaatcgtagctcgtgccttaactgcacctttaaaacgtattgccgaaaacgctggtcaa
aatggtgctgttgtagctgaaagagttaaagaaaaagacttcaacactggttatgatgct
tctaacaatgagtacgtggatatgttcgccgcaggtattgttgatcctgctaaagtaacc
cgttctgctattcaaaatgcagcttcgatcgctggaatggtattaaccactgaatgtatt
attgttgacaaacctgagaaagataaagctcccgctcctgccggtggcggtgacttcgat
tactaa
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