Geminocystis sp. NIES-3709: GM3709_3530
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Entry
GM3709_3530 CDS
T04142
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen00260
Glycine, serine and threonine metabolism
gen00460
Cyanoamino acid metabolism
gen00630
Glyoxylate and dicarboxylate metabolism
gen00670
One carbon pool by folate
gen00680
Methane metabolism
gen01100
Metabolic pathways
gen01110
Biosynthesis of secondary metabolites
gen01120
Microbial metabolism in diverse environments
gen01200
Carbon metabolism
gen01230
Biosynthesis of amino acids
gen01240
Biosynthesis of cofactors
gen04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GM3709_3530
09102 Energy metabolism
00680 Methane metabolism
GM3709_3530
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GM3709_3530
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GM3709_3530
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GM3709_3530
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GM3709_3530
Enzymes [BR:
gen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GM3709_3530
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAQ66765
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Position
complement(3953301..3954584)
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AA seq
427 aa
AA seq
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MSKTNLEFLADTDPAIAEIIANELQRQRGHLELIASENFTSPAVMAAQGSVLTNKYAEGL
PGKRYYGGCKFVDQAEDLAIERAKQLFGAEMANVQPHSGAQANFAVFLTLLKPGDKIMGM
DLSHGGHLTHGSPVNVSGKWFEVCQYGVSKETERLDYDQIREIALKERPKLIICGYSAYP
RIIEFDKFRSIADEIGAYLLADIAHIAGLVATGLHPNPLPYCDVVTTTTHKTLRGPRGGL
ILTRDAELGKQLNKAVFPGTQGGPLEHVIAGKAVAFGEALKPEFKTYCEQVILNSQTLGN
QLVKRGFKLVSGGTDNHLNLVDLRSISMTGKVADQLLGKTSITANKNTVPFDPESPFVTS
GLRLGSPAETTRGLKETEFTEVANIIADRLLNPEDEAVRLDCIKRVETLCDRFPLYPHLR
IPVHALV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaagactaacttagagtttttagccgatacagatccagcgatcgctgagattatt
gctaacgagttacaacgtcaaagaggacatttagagttaattgctagtgaaaattttact
tctcctgcggtaatggctgcccagggttcggttttaaccaataaatatgcagaaggttta
ccgggtaaacgttattatggtggttgtaaatttgtagatcaagccgaagatttagctata
gaacgagcaaaacagctatttggtgcagaaatggccaatgttcagccccattcaggcgca
caagctaattttgcggtgtttttaaccctcctcaaacctggggataaaattatggggatg
gatttatctcacggtggacacttaacccatggatcccctgtgaacgtctctggtaaatgg
ttcgaggtgtgtcaatatggtgtaagtaaagaaaccgagcgtttagactatgatcaaatc
agagaaattgctttaaaagagcgtccgaaacttattatctgcggttactctgcttatcct
cgcatcattgaatttgacaaatttagatcgatcgcagatgaaataggagcgtatttatta
gcagatattgcccatattgctggtttagttgccacaggattacatcctaacccccttcct
tattgcgatgtagtgactaccacaacccataagacattgagaggccctcgtggtggttta
atccttacccgtgacgcagaattaggtaaacaactcaataaagcggtattccccggtact
caaggaggccctttagaacacgtcattgcaggtaaagcagtcgccttcggagaggcatta
aaacccgaatttaaaacttactgtgagcaagttatcctcaattcccaaaccttaggaaat
caattagttaaaagagggtttaagttagtttctggtggtacagataatcacctcaactta
gtggatttacgatcgatcagtatgactggtaaagtggcagatcagttattaggtaaaacc
agcatcacagcgaacaaaaatactgtccccttcgatcctgaatctccttttgttaccagt
ggcttacgtttaggctctccggcagaaaccactagaggcttaaaagaaactgaatttacc
gaagttgctaacattatcgctgacagacttttaaacccagaagatgaagcagtaagatta
gattgtattaaacgtgttgaaacattgtgtgatcgattccccttatatcctcatttaaga
attcccgtacacgctttagtataa
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