Geminocystis sp. NIES-3709: GM3709_3618
Help
Entry
GM3709_3618 CDS
T04142
Name
(GenBank) group 2 RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gen03021
]
GM3709_3618
Transcription machinery [BR:
gen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM3709_3618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BAQ66853
UniProt:
A0A0D6AVC0
LinkDB
All DBs
Position
4073634..4074845
Genome browser
AA seq
403 aa
AA seq
DB search
MSKFYFQPVNDRSSVSSTSHSPYPPHDSPTLNFPTPPSQNIQNINSRDLMRLYLRDIGRI
RLLSKEEEITLARQIQTAQSLHQIKEQNDSVPELREYIRVMSSYDSLAGHHSQPPTVEIM
ANKLSISVPVLQKIILEGKQKWASLANLTIEELDKTLADGIKAKQMMIKANLRLVVSIAK
KYQNRGLELLDLIQEGTLGLEKAVEKFDYTKGYHFSTYSYWWIRQGMTRAIATQGRTIRI
PIHITERLNLLKKVQRQLSQTLGRMATVDEIAQKMNMTAPQLRQFLNQIPRSISLEMKVG
EDYNTELVELIEAESDTPEENLMRVSMQQDLQLMMSSLNEREQKILRLRFGFENGKIYSL
SDTASMMNLSRERVRQIQAKAIQKLRQPNQEKQLRDYLEIINS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagttttattttcaaccagtaaacgatcgctcatcggtttcgtcaacttctcat
tctccttatcctcctcatgactcaccgactttaaattttccaactccaccatctcaaaac
attcaaaacataaactctcgtgatttaatgcgcctgtatctccgtgatattgggcgcatt
cgtttattgagtaaagaagaagaaataactttagctaggcaaatacaaacagcacaatct
ctccatcaaatcaaagaacaaaatgactccgtacccgaacttagggaatatatccgtgta
atgtcttcttatgattctttggcagggcatcactcccaacctcccactgtggaaatcatg
gcgaataaattaagtatttctgttccagtattgcaaaaaattattttggaaggtaaacaa
aaatgggctagtttggctaatttgacgatagaagaactagataaaactcttgctgatggc
attaaggctaaacaaatgatgattaaggctaatttgcgtttagtggtttcgatcgctaaa
aagtatcaaaatcgtggtttagagctattagatttaattcaagagggtactttgggctta
gaaaaagcagtagagaaatttgactataccaaaggttatcactttagcacttattcctat
tggtggattcgtcagggtatgacaagagcgatcgccactcaaggtcgtacaattagaata
cctattcatattacagaaagattaaatttactcaaaaaagttcaaaggcagttatctcaa
actttgggacgtatggcaacagtagatgagattgctcaaaaaatgaacatgacagcacct
caattgcgacaatttttaaatcaaattcctcgatcgatttctttagaaatgaaagtagga
gaagattataatactgaattagtggaattaattgaagcagaatcggatacgccggaagaa
aacttgatgcgagtatcgatgcaacaagatttacagctaatgatgtctagtttaaatgaa
agagaacaaaaaattctacgattgcgttttggttttgaaaatggcaaaatttactcttta
agtgatactgcatctatgatgaatttatcaagagaaagagtgagacaaattcaggctaaa
gctattcaaaaattaagacaaccaaatcaagaaaaacagttgcgggattatttagaaata
attaatagttaa
DBGET
integrated database retrieval system
