KEGG   Geminocystis sp. NIES-3709: GM3709_3694
Entry
GM3709_3694       CDS       T04142                                 
Name
(GenBank) helix-turn-helix motif
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
gen  Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:gen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gen03000]
    GM3709_3694
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gen02048]
    GM3709_3694
Transcription factors [BR:gen03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    GM3709_3694
Prokaryotic defense system [BR:gen02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    GM3709_3694
SSDB
Motif
Pfam: HTH_3 UBR4
Other DBs
NCBI-ProteinID: BAQ66929
UniProt: A0A0D6AWR9
LinkDB
Position
pGM3709_01:6637..7014
AA seq 125 aa
MHTTTIKPIRNEQDYQETLTRIEQLMEAIPNTPEFDELDVLTTLVEAYEEKHYPIAPPNP
IDAIKFRMEQLGLKQSDLIPYIGSKSKVSEILSNKRALSKQMIRSLHESLNIPLEVLIQP
YPLNN
NT seq 378 nt   +upstreamnt  +downstreamnt
atgcacaccacaaccattaaacccatcagaaacgagcaagattaccaagaaaccctcacc
agaattgaacagctaatggaagccataccaaatacgccagaatttgacgaattggatgta
cttaccaccctagtggaagcctacgaagaaaaacattatcccattgccccaccaaatccc
atcgatgccattaaatttagaatggaacaacttggactcaaacagagtgacttaataccc
tacatcggcagtaaatcaaaggtatctgaaatcctatccaataaacgagcattaagtaaa
cagatgattcgctcattacatgaaagcctaaacattcccctagaagttttaattcaacct
tatccccttaataattaa

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