Geminocystis sp. NIES-3709: GM3709_397
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Entry
GM3709_397 CDS
T04142
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gen
Geminocystis sp. NIES-3709
Pathway
gen00300
Lysine biosynthesis
gen00470
D-Amino acid metabolism
gen01100
Metabolic pathways
gen01110
Biosynthesis of secondary metabolites
gen01120
Microbial metabolism in diverse environments
gen01230
Biosynthesis of amino acids
Module
gen_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GM3709_397
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GM3709_397
Enzymes [BR:
gen01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GM3709_397
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FlgN
Motif
Other DBs
NCBI-ProteinID:
BAQ63632
UniProt:
A0A0D6ALE1
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All DBs
Position
465644..467044
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AA seq
466 aa
AA seq
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MLLTEKSTAEKLILTSDSQSSPNQRLLPLTATINEQNHLEIGGCDVTELVTQFGSPLYIL
DEKTLRTCATQYRDAFKEFYPGESQVIYASKAWSCMTIVSILASEGIGFDVVSGGELYTT
TKALEISGYTENQISDKIYLHGNNKSVSELELAIDSQCKIIVDNWLELETLAQLTAQKQQ
CVNILIRLTPGIECHTHEYIRTGSIDSKFGFSVHQLEAVFTFVKQQSYINCIGLHAHIGS
QIFELQPHHDLAGVLADWFKKALDYGLPVKELNVGGGLGIRYTESDDPPSITAWVKTVAT
AVKKACEERNLALPKLIAEPGRSMVATACVTAYTVGGRKVIPDIRTYVSVDGGMSDNPRP
ITYQSLYQVVIGNKMREGNTEKVTIAGKHCESGDILIKDIEIPDTQPGDVLVVLATGAYN
YSMASNYNRLARPAAVLVNQGEANLIIRRETYDDLVKQDLIPSRLS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctactaacagaaaaatctacagcagaaaaattaatcttaacttctgattctcaaagt
tcccccaatcaaagattattacctcttactgccactatcaacgaacaaaatcaccttgaa
ataggtggttgcgatgttactgaattagtaactcaatttggttctcctttgtatattctc
gatgaaaaaaccctgcgtacttgtgcgactcaatatcgggatgcttttaaagagttttat
ccgggtgaatctcaagttatttacgcctctaaagcatggagttgtatgacgatcgtcagc
attttggctagtgaaggtatcggttttgatgtggtttctggcggagaactttatacaaca
actaaagccttagaaatcagtggttatactgaaaatcaaattagcgataaaatctatttg
cacggtaataataaatctgtaagtgagttagaacttgcgatcgattctcagtgtaaaata
attgtagataactggttagaattggaaaccctagcccaattaaccgctcaaaaacagcaa
tgcgttaatattttaattcgtttaacccccggtattgaatgccacacccacgaatatatc
cgtactgggagcatcgatagtaaattcggtttttctgtccatcaactagaagcagtattt
acttttgtcaaacagcagtcatatattaattgtattggtttacacgcccatataggttca
caaatttttgaattacaacctcatcacgacttagcaggagttttagctgattggtttaaa
aaagctcttgattatggtttacccgtgaaagagttaaatgttggtggtggtttaggtatt
cgttacacagaatctgatgatcccccaagtattacagcatgggttaaaactgttgctacg
gcagttaaaaaagcctgtgaagaaagaaatttagcccttcccaaacttattgccgaaccc
ggtcgatcgatggttgcaacagcgtgtgttactgcttataccgtaggcggaagaaaagtt
atccctgacatcagaacttatgtatcggtagatggtggaatgtcagacaatccccgccca
attacctatcaatctctttatcaagtagtgattggcaataaaatgcgtgaaggtaataca
gaaaaagttacgatcgccggaaaacattgtgaatcaggagatattttaatcaaagacatt
gagattcccgatacccaacccggagatgtgttagtggtattagcaacaggagcttataac
tacagtatggcttctaattataatcgtttagctcgtcctgcggcggttttagtcaatcaa
ggagaagcaaacttaattattcgccgtgaaacctatgacgatttagttaaacaagactta
atacccagtcggttaagttaa
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