Geminocystis sp. NIES-3709: GM3709_63
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Entry
GM3709_63 CDS
T04142
Name
(GenBank) ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gen
Geminocystis sp. NIES-3709
Brite
KEGG Orthology (KO) [BR:
gen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gen03016
]
GM3709_63
Enzymes [BR:
gen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GM3709_63
Transfer RNA biogenesis [BR:
gen03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GM3709_63
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
LPD26
Motif
Other DBs
NCBI-ProteinID:
BAQ63298
UniProt:
A0A0D6AKG1
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All DBs
Position
complement(96381..97016)
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AA seq
211 aa
AA seq
DB search
MSLDKFQVCEQDLPQDIFNQYLKAESLAIDTETMGLIPQRDRLCLVQICDAEGYVTAIRI
AKGQTTAPNLTKLLESVNITKIFHYARFDVAQFKHTFGVETTSIFCTKIASKIARTYTQS
HGLKSLVQELEGIELDKKAQSSDWGNVNSLSPEQLSYAANDVRYLIPVREKLITMLKRED
RWELTQRCFDTISLFVDLDLMYYGNVFEHQG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagataaatttcaagtttgtgaacaggatttaccccaagatatatttaatcaa
tatcttaaggccgaatctttagcgatcgacacagaaactatgggtttaattcctcaacgt
gatcgactttgcttagtacaaatatgtgacgcagaaggatatgtaacggccattcgtatt
gccaaaggacaaaccacagcacctaatttaactaaactattagagtctgttaatattact
aaaatttttcattatgcccgttttgatgtggctcaatttaaacacacttttggggtggaa
acaacatctattttttgtactaaaattgccagtaaaattgcccgtacttacacccaaagt
catggtttaaaaagtctcgtacaagaattagaaggtatagaattagataaaaaagcccaa
agttccgattggggtaatgttaatagcttatcccccgaacaattaagctatgcggctaat
gatgttcgttatctcatccccgtgagagagaaattgattactatgttaaaaagagaagat
cgctgggaattaactcaaagatgtttcgatactatttctctctttgttgatttagattta
atgtattatggtaacgtttttgaacatcaggggtaa
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