Geotalea daltonii: Geob_0176
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Entry
Geob_0176 CDS
T00846
Name
(GenBank) sigma-54-dependent sensor transcriptional regulator, PAS and GAF domain-containing
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
geo
Geotalea daltonii
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
geo03000
]
Geob_0176
Transcription factors [BR:
geo03000
]
Prokaryotic type
Helix-turn-helix
Other families
Geob_0176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
AAA_2
AAA
HTH_8
GAF
PAS_9
AAA_3
PAS_10
AAA_16
IstB_IS21
Mg_chelatase
AAA_22
DUF815
TIP49
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACM18549
UniProt:
B9M8L4
LinkDB
All DBs
Position
complement(215934..217904)
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AA seq
656 aa
AA seq
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MKSSSDFFLEKFRELEDLFADLQFGFAVLDRDLHFIHVNGQLAKIDGKPVEQHAGRSIED
INPQIALAMEPILLRVMRDNRPFFELAVDIHSTAAAHTAMNNTWQVRCYPLNADDGEVLG
VSLVVLDVTEQKLREAAQIERLQFESLLSTLSTTFINVPVSEVDSKIVQGLQKIVDFLGF
DRSTVWRVDPDTGEMICTHSYELPGIMPPLPILPPDMVPVWNSMVKSGEIFKISDSDELP
ESFQREKLYCRDRGGIRSIMFIPSRVGGVVEGFITFVSYSVIRAWPDDLIQRLRILWEIF
ANALERKRADQKIQHALAEIKTLKDRLEAENIYLRDQIDIEYKPDDIIGQSTAIRGVLRQ
LQQVAHTDSTVLLLGETGTGKELLARAIHNLSGRRERSMIKVNCAALPATLIETELFGHE
KGAYTGAAARHVGRFEAANGSTIFLDEIGELPLDLQSKLLRVLQEGQFERLGSTRPIDVD
TRVIAATNRDLAREVKEGRFREDLYYRLNVFPISVPPLRERKEDIPLLVSAMVKEFAGAF
GKTIERVPKKNMDALVHYTWPGNIRELRNMVERAMILSNGPTLEIDIPDGTPTTVARAAL
LKEVEQLHILSIMEKTGWRIRGKNGAAELLGLKPTTLESRMKKLGIKRCLSSSEIS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctcatctgatttctttctggaaaaattcagggagcttgaagatttgtttgcc
gatttgcagttcggttttgccgtccttgacagggacctgcacttcatacacgtcaatggg
cagctggcaaagattgatggcaagcccgtcgagcaacatgccggaagaagcatcgaagat
ataaacccgcagatcgccctggccatggagcccattctgctccgcgtcatgagggacaac
aggccgttcttcgaactggcggtagacatacacagcaccgccgcagcccacacggcaatg
aacaacacctggcaggtccgctgctacccccttaacgccgatgatggtgaagtgctgggt
gtaagtcttgtcgtactggacgttacggagcagaaactgagagaagcagcgcagattgag
cggctgcaattcgaatcgcttctctcgacactttccacaacctttatcaacgtgccggtc
agtgaagttgacagcaagatcgtccagggactgcagaagattgtcgacttcctcggtttc
gaccgcagtactgtctggcgggtcgatccggacaccggtgaaatgatctgcacccactcc
tatgaactccccggcatcatgcctcccctgcccattctcccgcccgatatggttcccgtc
tggaattccatggtcaaatccggtgaaatcttcaagatttccgatagcgatgaactgccc
gaatcgttccagcgcgagaagctctactgccgtgaccggggaggcatccgctcgatcatg
ttcattccctcccgcgttggcggtgtggtcgaaggattcatcacctttgtctcatacagc
gtcatccgggcctggcccgacgatctcattcagcgcctgcgcatcctgtgggagattttt
gccaatgccctggagcggaaacgggcggatcagaagattcagcacgccctggcggaaatc
aagaccctgaaggaccggctcgaagctgaaaatatctatttgcgcgaccagatcgacatc
gagtacaaaccggacgatatcatcggccaatcgacggctatccgcggcgtgctgcggcaa
ctgcaacaggtggcccataccgactccaccgttcttctcctgggggaaaccggtacggga
aaggaactactggcccgcgccatccataacctgagcggacgccgggaacgctccatgatc
aaggtgaactgcgccgccctgccggccaccctgatcgaaaccgaactgttcggccatgaa
aaaggggcttacacgggagccgcggcaaggcatgtgggacgctttgaagccgccaatggc
tcgaccattttcctggatgaaatcggagagctgccccttgatctccagtcaaagcttctc
agagttcttcaggaggggcagtttgaaagacttggcagcaccaggcccatcgacgtcgat
acccgcgtcattgccgccaccaaccgggacctggcccgggaagtcaaggaaggccgattc
agggaggatctctactatcgactgaacgttttccccatttcggtccccccgctacgggag
cgcaaggaggatattcccttgctcgtctcggccatggtcaaggaatttgccggtgctttc
ggcaagaccatcgagcgggtgccgaaaaaaaacatggatgcactggtgcattacacctgg
ccgggtaatatccgggaactgcgcaacatggtggaacgggccatgatcctcagcaacggc
ccgacccttgagattgatattcctgacggtaccccgactactgtagccagggcagcactg
cttaaagaggtggaacagctgcacatcctttccatcatggaaaaaacgggctggcgcatc
cgcggcaagaacggcgccgctgaacttctgggactcaagccgactaccctggaatcgaga
atgaaaaaactgggtatcaagcgctgcctgtcatcctccgaaatatcgtaa
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