Geotalea daltonii: Geob_0406
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Entry
Geob_0406 CDS
T00846
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
geo
Geotalea daltonii
Pathway
geo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geob_0406 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_0406 (recQ)
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_0406 (recQ)
Enzymes [BR:
geo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Geob_0406 (recQ)
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Geob_0406 (recQ)
DNA repair and recombination proteins [BR:
geo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Geob_0406 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACM18775
UniProt:
B9LZ43
LinkDB
All DBs
Position
481390..483207
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AA seq
605 aa
AA seq
DB search
MEANPQQTLLKVFGYKSFRQPQQEIVEGLIRGEDAFVIMPTGGGKSLCYQIPALHRPGVA
IVVSPLISLMKDQVDALQANGVKAAFYNSSLSEAKARQVLAQMHDDALDLLYVAPERLMS
EPFLERLEDVKVALFAIDEAHCVSQWGHDFRPEYVQLGRLRQLFPQVPLIALTATADPQT
RNDIIERLGLGTAACYVAGFDRPNIRYLVTEKHKPFDQLRSFLSSRQPGEPGIVYALSRK
RVEEVAARLVQSGVAAAPYHAGLPERERSRVQEAFQRDELQVVVATVAFGMGIDKSNIRF
VVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDIAVARGLIENGTNAEQKRIELHK
LNAMVGFAEAVTCRRRVLLGYFGAALNHDCGNCDVCIDPPQRYDATVEAQKALSCVFRVG
QRFGMGHVIDVLRGAGNQRIQSLGHDRLSTYGIGKDISVDMWGSIIRQLVHLGYLEQDLA
SYSVLKLTPAARVLLRGEERLVLARPRHKTASAQKAPRNKGEVPCDDALFQTLRALRKRL
ADEAGVPPFVVFSDATLTEMAAMRPVDAEGLLSVSGVGIHKLGRYGEEFLTVLREYTANN
APAST
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaatccgcaacaaaccctgctcaaggtctttggttacaaatcttttcgtcag
ccgcagcaggagatagtagagggactgatccgcggcgaggatgcctttgtcatcatgccc
accggcggcggcaagtcgctctgctaccagattcctgccctgcacaggccgggtgtggcg
attgtggtgtcaccgctcatttccctgatgaaggaccaggtagatgccctgcaggccaac
ggtgtgaaggcggccttctacaactcttccctgtccgaggctaaggccaggcaggtgctg
gcgcagatgcatgatgatgctctcgacctgctttacgtggcaccggaacggctgatgtcc
gagccgtttctggagcggcttgaggatgtaaaagttgccctttttgccattgatgaagcc
cactgtgtttcccaatgggggcatgactttcgcccggaatatgtgcagttggggcgattg
cgccagctttttccgcaggttcccctgattgcccttactgcaactgccgatccccagacg
agaaacgacatcatcgaacgactcggcctggggacggcggcttgctatgttgcgggattc
gacaggccgaacatccgctatctggtgacggaaaagcacaaaccatttgatcagctgcgc
tcgttcctctccagccgccaaccgggggaaccgggtatcgtctatgccctgagcaggaag
cgggttgaagaggtggcggcgcgcctcgtccagtccggagtggccgcagctccctatcat
gccgggcttcccgaacgtgaacggtcgcgggtgcaggaggctttccagcgagacgaactg
caggtggtggtggcaacggtcgccttcggtatgggaatcgataagtccaatatccgcttc
gttgtccattacgatttgcctaaaaatatcgaaagttactatcaggagactggccgcgcc
gggcgtgatgggcttccggcggaggcgctgctccttttcggctacggcgacatcgctgtt
gcccgtggtctgatcgaaaatggcaccaatgctgaacagaaaagaatcgagctgcacaag
ctgaatgccatggtcggttttgccgaggcagtgacgtgccggcgcagggttcttctcggc
tatttcggggcggcattaaaccacgattgcggcaactgcgatgtctgcatcgatccgcca
cagcgctacgacgcaacggtggaggcgcaaaaggcgctctcttgcgtttttcgcgttggg
cagcgtttcggcatgggtcacgtgatagatgtgttgcgcggcgccgggaaccagcgcatc
cagtcactgggccatgaccggctgtcgacctacggcatcggcaaggatatatctgtggac
atgtgggggagtattattcgccaactggtacacctgggttacctggagcaggatctggct
tcctattctgtattgaaactgacgccagccgcacgcgtcctgttgcgcggcgaagagcgg
ctggttctggcgcgaccgcgccataaaacggccagtgcccaaaaggcaccgcgcaacaaa
ggcgaagtgccctgcgatgatgctctctttcagacgttgcgcgctttgcgcaagcgtttg
gccgacgaggcaggggtacccccattcgttgtcttcagcgatgccaccctcacggaaatg
gctgcaatgagaccggtggatgcggagggcctgctttcggtgagcggcgtggggatacac
aagctggggcggtacggagaggaattccttacggtgctgcgcgaatacacagccaacaac
gctcctgcctcaacctaa
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