Geotalea daltonii: Geob_0681
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Entry
Geob_0681 CDS
T00846
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
geo
Geotalea daltonii
Pathway
geo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geob_0681 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geo03021
]
Geob_0681 (rho)
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_0681 (rho)
Transcription machinery [BR:
geo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Geob_0681 (rho)
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Geob_0681 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
OB_RNB
ATPase_2
AAA_25
AAA
S1CSD-TOTE-2
Spore_III_AA
Fungal_virus_P2_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACM19045
UniProt:
B9M0K8
LinkDB
All DBs
Position
754383..755630
Genome browser
AA seq
415 aa
AA seq
DB search
MNLQELKGKKINELAAIAKGLNIEGASSLRKQDLIFAILNAQTEKNGMIFGEGVLETLPD
GFGFLRAPDYNYLPGPDDIYVSPSQIRRFNLHTGDTVSGQIRPPKEGERYFALLKVESVN
HESPDVARDKILFDNLTPLYPEEKLKLETTPENMSMRVMELIAPIGKGQRGLIVAPPRTG
KTMLIQNIANSIAENHPEVFLIVLLIDERPEEVTDMQRSVNGEVISSTFDEPASRHIQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVIPPSGKILSGGVDSNALHKPKRFFGA
ARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLDRKLVEKRTFPAIDINKS
GTRKEELLIEKNSLNRIWILRKVLHPMNVVDSMEFLLSKLDGTKSNQAFLDSMSK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacaagaattaaaaggtaaaaaaatcaatgaactggcggccattgccaagggg
ctgaacattgagggggcatcaagcctgcgcaaacaggacctgatttttgccatcctcaat
gcccagaccgagaaaaatggcatgatctttggcgagggggtgctggaaacccttcccgat
ggcttcggttttctccgggcgccggattacaactatctgccggggccggatgatatttat
gtgagccccagtcagatccgccgcttcaatctccataccggcgatacggtttcggggcag
atcaggcctccaaaggagggtgagcgttattttgccctgctcaaggtggagtcggtcaat
cacgaatctcccgatgttgccagggacaagatcctcttcgacaacctcacccccctttac
cccgaagagaagttgaagctggaaacgaccccggaaaacatgtccatgcgggtcatggag
ctgatcgctcccatcggcaaggggcagcgcggcctgatcgtcgcacctccccgaaccggc
aagaccatgcttatccagaacattgccaactccatcgccgaaaaccatccggaagttttc
ctgatagtcctgttaatcgacgaaaggccggaagaggtcaccgacatgcagcggtcggtc
aatggcgaggttatttcatccaccttcgacgagcctgcctcgcggcacatccaggtggcc
gagatggttatcgagaaggccaagcgccttgtggagcacaaacgggatgtggtcatactc
cttgattccattacccgtctggcccgtgcctataataccgtcattcccccttccggaaaa
attctttccggtggtgtggattccaatgccctgcataagccgaaacgctttttcggcgcc
gcccgcaatatcgaagaaggtgggtcgttgaccattatcgctaccgccctggtcgatacc
ggtagcaaaatggacgaggtcatcttcgaagaattcaaaggcaccggcaacatggagctt
catctggatcgcaagctcgtggaaaaacggacctttcctgccatcgatatcaacaagtcc
ggaacccggaaggaagagctgctcatcgaaaagaactccctcaaccgcatctggattttg
cgcaaggttctccatccgatgaatgttgtagacagcatggaatttctcctttcaaaactg
gacggaaccaagagtaatcaggcatttctggactccatgagcaagtga
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