Geotalea daltonii: Geob_1233
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Entry
Geob_1233 CDS
T00846
Symbol
pcnB
Name
(GenBank) nucleic acid-independent polyadenylating polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
geo
Geotalea daltonii
Pathway
geo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geob_1233 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_1233 (pcnB)
Enzymes [BR:
geo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Geob_1233 (pcnB)
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Geob_1233 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
FXR_C1
Motif
Other DBs
NCBI-ProteinID:
ACM19593
UniProt:
B9M3V0
LinkDB
All DBs
Position
complement(1352768..1354123)
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AA seq
451 aa
AA seq
DB search
MEPLKPLIISRADHNISRRSLSPNAVKVLYRLKDNGFTAYLVGGGVRDLLLGREPKDFDI
VTDATPLQIKKMFRNCRLIGRRFRLAHLHFQDEIIEVATFRSARLDDVPAEEPAAMDESE
GHTLTGRSPLLLKSEDGMVLRDNIFGTPAEDAVRRDFTVNALAYNISDFSLIDYVGGLDD
LQRGVIRTIGDSGIRFVEDPVRMIRAVRFAAMLGFRVEETTWQTILELSPTVTKASPPRL
YEEVLKLFLLGAGERTYQLLRQSGIFSALFPHFNDWLERESDGFPHTWVGKALDHLDNAI
QNGEKVQPPLLFALMFSQYLQEKAESFRKAGLPAHPAVNAAVAEFMGEVAPTVQFPNRVA
ILIRDILTSQHRLRKIPGRHPETFATRHGFAEALSYLRFASAITGEDKKVLAWWEKFQLE
PQSDIRPDGEPLQKRRRRRKRRKKTSEKPGI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaccactcaagccgctgataatatcccgtgcagaccacaacatctctcgccgctcc
ctgagtcccaatgctgtcaaagttctctatcgtctcaaggacaacgggtttaccgcctat
cttgtcggaggtggagtacgagacctgctgctgggcagggagccgaaagattttgatatc
gttaccgatgccactccgttgcagatcaagaagatgttccgcaactgccgcctgatcggg
aggcgctttcggctggcccacctgcattttcaggatgaaataatcgaagtggcaaccttc
cgctctgccagactggatgatgtacctgcagaagaaccggccgccatggatgaatcggaa
ggccacactttaaccggccgctcgccactgctgctgaaaagcgaagacggcatggtattg
cgcgataatatcttcggcacccccgcagaagatgcggtcaggcgcgacttcaccgtcaac
gccctggcttacaatatcagtgatttttctctaatcgattatgtgggcggcttggatgac
ctgcaaagaggggtgatccgcaccatcggcgactccggaatccggttcgtggaagatccg
gtacggatgatccgcgctgtgcgattcgccgccatgttgggcttccgcgtcgaagaaaca
acctggcagaccattctggagctcagccccactgtcacgaaagcttcgccacccagactt
tatgaggaagtactcaagctgttcctgctgggggcaggtgaacgcacctaccagctcctg
cgacagagcggcattttttccgctctcttcccccacttcaatgactggctcgaaagggaa
agtgacggattcccccacacctgggtcggcaaggccctggatcacttggacaatgcgatt
caaaacggggaaaaagtgcaacctcccctgctttttgccctcatgttcagccaatacctg
caggagaaagcggaaagcttccgcaaggcgggcctgcctgctcaccctgccgttaatgct
gctgttgccgaattcatgggtgaagtagcccctaccgtccagtttcccaatcgggtcgct
atcctcattcgcgatatcctcaccagccagcaccgtctgcgcaagataccggggcgccac
ccggagactttcgccacacgccatggttttgccgaggcattgtcttacctgcgctttgct
tccgccattaccggagaagacaaaaaggtcctggcatggtgggaaaaatttcagctggaa
cctcaatctgatattcgacccgatggggagcctctgcaaaaacgtcgacggcgcaggaaa
cgaaggaaaaaaacttcggaaaaacccggtatatga
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