Geotalea daltonii: Geob_1575
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Entry
Geob_1575 CDS
T00846
Symbol
mutM-1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
geo
Geotalea daltonii
Pathway
geo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Geob_1575 (mutM-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_1575 (mutM-1)
Enzymes [BR:
geo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Geob_1575 (mutM-1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Geob_1575 (mutM-1)
DNA repair and recombination proteins [BR:
geo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Geob_1575 (mutM-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Auto_anti-p27
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ACM19933
UniProt:
B9M5V2
LinkDB
All DBs
Position
complement(1732805..1733620)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETIRRAVGPQVRGKRIIHTNVRATKLRHPLPPELDRLLVGQLIVAMDRRGKYL
LLRCKGGTIIFHLGMTGMLYLVKASSPHGKHDHLDLVLDGSYILRFTDPRRFGTIIWTDN
DPLQHPLLVAHGPEPLEAEFSASYLYLKRHRRKIPIKQLIMDSRVVAGIGNIYANESLFR
AGIAPQTSASDLSPDKDLLLVDAIKGVLTDAVEAGTSNIESALTGERPQGYFPYEFSIYG
KKGRPCPKCGSAIRMMRLGGRSTFFCPLCQK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactaccggaagttgaaaccatacgccgcgccgtcggaccacaggtcaggggc
aaaagaatcattcacaccaacgtccgcgccacaaaactgcgccatccacttccacctgaa
ctggaccggctgctagtcgggcagctaatagtcgccatggaccggcgaggtaaatatctg
cttttacgatgcaaagggggcacgataatctttcatctcgggatgaccggcatgctctac
ctggtcaaggcaagctctccccacggcaaacatgaccacctggacctggtgctggatgga
agttacatactgcgctttaccgatccacgccgcttcggcaccatcatctggacggataat
gatccgctgcagcaccctcttttggttgcccatggcccagaacctctggaagcagaattc
tcagcaagttatctgtatctgaagagacaccgacggaagattcccatcaagcagctgatc
atggacagtcgtgtggtagcaggtatcggtaatatctacgccaacgagtccctttttcgt
gccggcattgccccgcagacgtcagccagtgatctttcacccgataaggacctgttgctg
gtcgatgccattaagggggtcctgactgatgccgtcgaagcaggaacctccaacatcgaa
agtgccttgacaggcgaaaggccccaaggctattttccttatgaattcagcatttatggc
aagaaaggccgcccctgcccgaagtgtggctcagcaatcaggatgatgcgactgggtggc
agatcgacctttttctgtcccctctgccagaaatga
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