Geotalea daltonii: Geob_1974
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Entry
Geob_1974 CDS
T00846
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
geo
Geotalea daltonii
Pathway
geo03420
Nucleotide excision repair
geo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Geob_1974 (rep)
03430 Mismatch repair
Geob_1974 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_1974 (rep)
Enzymes [BR:
geo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Geob_1974 (rep)
DNA repair and recombination proteins [BR:
geo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Geob_1974 (rep)
MMR (mismatch excision repair)
Other MMR factors
Geob_1974 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACM20331
UniProt:
B9M865
LinkDB
All DBs
Position
2213946..2215982
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AA seq
678 aa
AA seq
DB search
MLDLFNLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLDKKVPPANILAVTFT
NKAAKEMRERVDGLVGRAACKGLIISTFHSLGVRILRRDIERLGYKKNFSIYSTTDQIGL
IKQIMREVNIDGKKFDGDTIIWKISAAKNKLITPDRYVPRFGDEYELLAAEVYPRYQSAL
KAFNAIDFDDIIMLTADLLQNHPEVLKHWQERFRYVMVDEYQDTNASQYLLVHLLAGGYG
NLCVVGDDDQSIYGWRGADVGNILDFEKDFKECRVIKLEQNYRSTGNILEAANHVIGHNE
KRKEKRLWTASGSGRPLDIIVVQDDEEEATTVVERVQVERLAHNLAYSDFAILYRTNAQS
RAFEEQLRFEDIPYVLIGGMQFFERKEVKDAISYLKVIGNANDEIALLRIVNFPKRGIGD
STVVRINQWSMEQGCPLFEAFGRVDEIEGVAEATKLKVRDLHRLLAEEMTIFEQEGELAE
KGKRLFKRLGLEDELYRTIDDPVLARRKAENIEQIVNSMAAYEERIPMPSLSGFLEKVSL
MDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPFVFLVGMEEEILPHKRSIYEDFSVDEE
RRLCYVGITRARKHLVMTRCLQRKKYGKLQERVPSRFLEEIPAHLVKEQQGIAAKTLTEE
ETDKMADDFFARMKAMLE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgatttattcaacctcaatccccagcaactggcggcggtaaaacataccgaaggg
gcgctcctggtcctggccggggcgggttccggcaagaccggggtcatcacctaccgcatt
gcccatctgcttctggacaagaaagtgccgccggccaatatcctggcggtgactttcacc
aacaaggcggccaaggagatgcgggagcgggtggatggactggtggggcgggccgcctgc
aaggggctcatcatctccaccttccattccctgggggtgcgcatcctgcgccgggacata
gagcggctcggttacaagaagaatttctccatctattcgaccaccgatcagatcggcctg
atcaagcagatcatgcgcgaggtcaatatcgacggcaagaagttcgatggggataccatc
atctggaagatctcggcggcgaaaaacaagctgatcaccccggaccgctacgttccccgc
ttcggcgacgaatacgagctgctggcagcggaggtctatccccgctaccagtcggcactg
aaggccttcaatgccatcgatttcgacgacatcatcatgctgacggctgacctgctgcag
aatcaccccgaggtgctaaagcactggcaggaacgcttccgctatgtgatggtcgatgaa
tatcaggacaccaatgcctcccaatatctgctggtacacctcctggccggcggctacggt
aatctctgtgtggtgggggatgacgaccagagcatctacggctggcgcggcgcggacgtg
ggcaacattcttgatttcgagaaggatttcaaggagtgccgggtcatcaagctggaacag
aactaccgctccaccggcaatatcctggaggcagcaaaccatgtcatcggccacaatgaa
aagcgtaaggagaaacggctctggacagcttccggcagcggccgtcccctggacatcatt
gtcgttcaggatgatgaagaggaggccaccacggtggtcgaaagggtccaggtggagcgg
ctggcccacaatcttgcctacagcgactttgccatcctttaccgtaccaatgcccaaagc
cgtgccttcgaggaacaactgcgcttcgaggacataccctatgtgctcatcggcggcatg
cagttcttcgagcgcaaggaggtaaaggacgccatttcctacctcaaggtgatcggcaac
gccaatgacgagatagctctgttgcgcatcgtcaacttccccaagcgggggatcggcgac
agcacggtggtgaggatcaaccagtggtccatggagcagggctgtcccctgttcgaggcc
ttcggtagggtcgacgagatcgagggggtcgcagaagcgacaaagctgaaagtgcgggat
ttacaccggctgctggccgaggagatgaccattttcgagcaagagggtgaactggcggaa
aaagggaagcggcttttcaaacgtctgggactggaggacgagctgtaccggaccatagat
gatccggtgctggccaggaggaaggcggaaaacatcgagcagatcgtcaactccatggct
gcctatgaggagaggattcccatgccttccctgtccggttttctggaaaaagtctccctc
atggacgaggaccgcttctcgggcaaggacaagaaggagcacggccgagatgccgtgacg
ctcatgtcgctccattccagcaaggggctggagtttccttttgtcttcctggtggggatg
gaagaggagatccttccccacaagcggtccatctatgaggatttttccgtagatgaggag
cgccggctctgctatgtggggatcacccgcgccagaaaacatctggtgatgacccgctgt
ctgcagcgcaagaagtacggcaaactgcaggaacgggtgccgagccggtttcttgaagaa
attccggcgcatctggtcaaagagcagcaaggcatcgcagccaagaccttgaccgaagag
gaaacggataaaatggccgatgatttctttgccaggatgaaggcgatgctggaataa
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