Geotalea daltonii: Geob_2572
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Entry
Geob_2572 CDS
T00846
Name
(GenBank) DNA helicase, DEAD_2 domain-containing
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
geo
Geotalea daltonii
Pathway
geo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Geob_2572
09124 Replication and repair
03420 Nucleotide excision repair
Geob_2572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geo03021
]
Geob_2572
03036 Chromosome and associated proteins [BR:
geo03036
]
Geob_2572
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_2572
Enzymes [BR:
geo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Geob_2572
Transcription machinery [BR:
geo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Geob_2572
Chromosome and associated proteins [BR:
geo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Geob_2572
DNA repair and recombination proteins [BR:
geo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Geob_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
ATPase
Motif
Other DBs
NCBI-ProteinID:
ACM20923
UniProt:
B9M0S0
LinkDB
All DBs
Position
complement(2821074..2823497)
Genome browser
AA seq
807 aa
AA seq
DB search
MVAAQKLINIPLREFAIPVPRKGSIEALSGYGRAAAEGQEIHLKVQKKRAKSDGSYRSEV
AIGAEFQREEFCFRVDGRMDGLFDTEPPKIEEIKSTFNLSELARRLDNQPLDHPYCLQLF
SYGYFYWLRQGVIPELSFHLVSSRSADSLDLPLQLDITLYEQWLEERLDELVRETRLAEK
RAARRRKMAAGFVFPFPDPRPGQIELMETIDQGMNEGKPMLIQAPTGLGKTVGVLYPVLK
EALGRGQQVIYVTPKNSQHSVAEDAVRRFHDTGSHLKSLSITAKGKICFKNEPLCNPEFC
EYALDYYTKVYEYGIRDLLARKRKLTARSFRELGEKYQVCPFELQLEGMEEADVVICDYN
YIFAPRSALSGMTNPGIDQTGKANLVIDEAHNLPSRAMECYSPALSSVVLEKMRNEIKSI
AQRFRREAENILDGCLSTVASCGHGKKPAVIEPPVDAFLEQDIRLRTLLTRYLESMVEIQ
HHDVILRLSFYWSEFTNALEYAADPARAEFFTTWHPTGTVKITCCDASAMIRDCYDNYQQ
VVAFSATLKPFDYYKTLSGLDLEKTLTAEFTSPFPTHRRKLMLIPQVSTRYSQRERNYAR
IAEAVVRIASLRRGNYIVFFPSFDFLERLAAFFQLPAGFSLILQERNIKTSQVKTIMEQL
QETNGANIVFAVQGGSLAEGMDYAGETLIGAFIVGPPLPSFDLEREEMRRYYQQRYGAGF
DYAYIIPAMAKAVQAAGRVIRSETDRGLIVLMDSRFTEPGYSRSMPADWFRSEARELVSD
SILGEVDEFWRSGDADEGLAADGLCQP
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagctcaaaaattaatcaacatccccctgagggaattcgccatacctgtgccc
aggaaagggagcatcgaggccctttcgggatacggccgcgcagccgccgagggccaggaa
attcatctcaaggtgcaaaagaagcgggcgaagagcgacgggtcctaccgctctgaagtg
gccatcggcgcagagtttcagagggaagagttctgcttccgggtggatgggcgcatggac
ggcctgtttgataccgagccgcctaaaattgaggagataaagtctactttcaacctgtcg
gaactggcccgccgccttgacaatcagccgctggaccatccctactgcctgcagctgttc
agttacggctatttttactggctcagacaaggagttatccctgagttatcctttcatctg
gtttcttcccgtagcgctgactcacttgatctgccgctgcagctggatattactctctat
gaacagtggctggaggaaagacttgacgaactggtcagggaaacacggttggctgaaaaa
cgggcagcccggcggcgaaagatggccgcaggctttgtctttcccttccctgatccgcgc
cccggccagattgaactcatggagaccatcgaccaggggatgaacgaagggaaaccgatg
ctgatccaggctcccaccgggttgggaaaaacggtcggcgtgctctacccggtactgaaa
gaggccttgggcagggggcagcaggtcatctacgtcacaccgaaaaacagccagcattcc
gttgccgaagatgccgtccgccgtttccatgataccggttcccacctcaaatccctctcc
attaccgccaagggaaagatctgcttcaagaacgaaccgttgtgcaaccctgaattctgc
gaatatgcactagattactacaccaaggtgtatgaatatggcattcgtgatcttcttgcc
cgcaaaagaaagctgacggcgcgtagttttcgggaactgggggagaaataccaggtctgt
ccattcgaattgcagcttgaggggatggaagaggccgatgtggtgatctgcgactacaat
tacatctttgcccccagatcggctctctccggcatgaccaacccaggtatcgaccagaca
ggcaaggcgaatctggtcatcgacgaggcacacaatcttccttcaagagcgatggaatgc
tattcgccggcgctctcctcggtggtattggagaaaatgcgtaatgaaataaaatctatc
gcacagcgttttcgcagggaagctgaaaacattctcgatggctgcctcagtaccgttgcc
tcctgcggccatggcaaaaaacctgctgttatcgagccccctgtagacgcatttcttgag
caggacattcgactgcgtacccttcttacccgctacctggagtccatggtggaaatacag
caccatgatgtcattctccgtcttagtttttactggtcggaattcaccaacgcccttgaa
tatgcggcagaccctgcgcgggcagaatttttcaccacctggcatccaaccggcacggtc
aaaataacgtgctgcgacgcctcagccatgatcagggactgctatgacaattatcagcaa
gtggtggccttttccgccacgctcaaaccattcgactactataaaaccctttccggactg
gacctggaaaagaccctgacggcggagtttacctcccccttccccacgcatcggcgaaag
ctgatgctgatcccgcaggtttcaacccgctacagccaaagggagcggaattatgcgagg
atcgccgaagcggtggtgcgcattgcctccctgcgccgcggcaattatatcgtcttcttt
cccagctttgattttctcgaacggttggcagcgtttttccaacttcctgccggtttctcc
ctcatcctgcaggagcggaacatcaagaccagtcaagtgaaaacgatcatggagcagctc
caggagaccaatggggcaaatatcgtttttgccgttcagggagggtccctggccgaaggg
atggactatgccggggaaacgttgataggtgccttcattgtcggaccgcccctgccgagc
ttcgatctggaaagggaggagatgaggcgctattatcagcagcgatacggcgccggtttc
gactatgcctatatcattcccgccatggccaaagcggtccaggcagccggcagagtcatc
cgctcggagaccgatcgcggtttgatcgtcctcatggacagcaggttcacggaacctggt
tacagccgttccatgcccgccgactggttccggtcggaggcaagggaacttgtttccgat
agtattctcggagaagtggacgaattctggcgcagtggagatgcggatgaaggtcttgcc
gctgatggtctgtgtcaaccttaa
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integrated database retrieval system
