Geotalea daltonii: Geob_2697
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Entry
Geob_2697 CDS
T00846
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
geo
Geotalea daltonii
Pathway
geo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geob_2697 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_2697 (pnp)
03016 Transfer RNA biogenesis [BR:
geo03016
]
Geob_2697 (pnp)
Enzymes [BR:
geo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Geob_2697 (pnp)
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Geob_2697 (pnp)
Transfer RNA biogenesis [BR:
geo03016
]
Prokaryotic type
tRNA degradation factors
Geob_2697 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_NusA_2nd
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ACM21047
UniProt:
B9M1G5
LinkDB
All DBs
Position
2963400..2965490
Genome browser
AA seq
696 aa
AA seq
DB search
METKVQVECGGRTITIETGKMAKQASGAVVVSSGDTRVLVTAVATKTAKEGQDFFPLTVN
YQEKAYAGGKIPGGFFKREARPSDNETLTCRLIDRPIRPLFPDNFLNDTQIMATVISADK
DNDPGILSMVGASAALMVSDIPFQGPIAGVKVGRIDGRFVANPGFEEMEKSDIEIVVAAS
KDAIIMVEGSAAEVSEEDMLEAIFFGHAAIQGLLAAQVELAEKAGVAKREVLPPVVNEAL
KAKVKELAYSRMKEAVRIKSKVERHNTIDTITGEVLTALAEEFEGAAKEIKGFLGDFEYD
LVREHIIKDGERIDGRDTKTIRQITTEVGLLPRAHGSALFTRGETQALVVATLGTSIDEQ
RIDSLFGESKKRFLLHYNFPPFSVGETSFRLAPGRREIGHGMLAERALARVVPKHESFPY
TIRIVSDILESNGSSSMASVCGGSMSMMDAGIPIKAPVAGIAMGLIKEGDDFAILSDILG
DEDHLGDMDFKVAGTSTGVTALQMDIKIGGVTREIMGVALKQAHEGRLHILSKMAETIGT
SKAELSTFAPRITTIYVKTDKIRDVIGSGGKNIRGITEATGVTIDIDDTGKINIASTDKA
ACDMAIKMIRDLTAEAEEGKLYMGLVKKVMEFGAFVEIFPGTDGLVHISELDTERVKNVT
DVLKEGDKVLVKCIGIDKQGKIKLSRKEALGASLPE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaaagtacaggttgaatgtggtggaagaaccatcaccatagaaacaggcaag
atggccaaacaggccagtggcgccgtggttgtcagcagcggcgataccagggttttggtg
acagcagttgccaccaaaactgccaaggaagggcaggatttctttccccttaccgtcaat
taccaggaaaaagcatatgccgggggcaagattcccggcgggttcttcaaacgtgaagcg
cgtccttcagacaacgagaccctgacctgcaggctcatcgaccgtccgatccgaccgctc
tttccggataatttcctcaatgacacccagatcatggccacggtcatctctgccgacaag
gacaatgatccgggtattctctccatggttggcgcttccgctgccctgatggtttcggac
atccccttccaggggccgatcgccggggtgaaggtgggcaggatcgacggccgtttcgtc
gccaatcctggtttcgaggagatggagaagagcgacatagaaatagttgtggcagcaagc
aaagacgccatcatcatggttgaaggaagcgcagcagaggtttcggaagaggatatgctg
gaggccattttcttcggtcacgcagccattcagggtcttttggccgcccaggtggaactg
gccgaaaaagccggcgttgccaagcgtgaggttcttcccccggttgtaaacgaagcgctg
aaagccaaggtaaaggaactggcctattcccgcatgaaagaagccgtgaggatcaaatcc
aaggttgagcggcacaatacgatagataccatcaccggagaggttctgactgccctggcc
gaagaattcgaaggtgctgcaaaagaaatcaagggtttccttggcgatttcgaatacgat
cttgtgcgtgagcacatcatcaaggacggcgagcgcatcgacggtcgggacaccaagacc
atccgccagataaccaccgaggtcggcttgcttcccagagcccatggttcggcccttttc
accagaggagagacacaggccctggttgtggctacgcttggtacatccatcgacgagcag
cgcatcgactccctgttcggcgagagcaagaagcgcttcctcctccactataacttcccg
ccgttctccgttggtgagaccagcttccgtctcgctccggggcgcagggaaatcggccac
ggcatgttggccgaacgggctcttgccagggtagtgcccaagcatgagagcttcccttac
accatcaggatcgtttccgacattctggagagcaacggctcttcatccatggcctccgtc
tgtggtggctccatgtccatgatggatgccggcatccccatcaaggctcctgttgccggc
attgccatgggcctcatcaaggaaggtgacgacttcgccattctttccgacattctcggt
gacgaggatcatctgggggacatggatttcaaggttgccggaacttcaaccggtgttacc
gccctgcagatggacatcaagatcggcggcgtcactcgcgagataatgggcgttgccctc
aagcaggcccatgaaggacgtctgcatatcctgagcaaaatggccgaaaccatcggtacc
tccaaggccgagctttccaccttcgcaccgcgcatcaccaccatctatgtgaagaccgac
aagatccgcgacgtcatcggttccggtggcaaaaacatccgcggcataaccgaggccacc
ggcgtcaccatcgacatcgacgacaccggcaagatcaatatcgccagtaccgataaggct
gcctgcgacatggctatcaaaatgatcagggatctgaccgccgaggccgaagaaggcaag
ctctacatgggcctggtgaaaaaagtcatggaattcggcgcctttgtcgagatattcccc
ggcaccgacggcctggttcacatctccgagctggatacggagcgagtcaagaacgtcacc
gacgtcctcaaggaaggggacaaggtactggtgaaatgcatcggcattgacaaacagggt
aagatcaaactgtcccggaaagaagcattgggcgccagcctgcccgagtag
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