Geotalea daltonii: Geob_2747
Help
Entry
Geob_2747 CDS
T00846
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
geo
Geotalea daltonii
Pathway
geo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Geob_2747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_2747
Enzymes [BR:
geo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Geob_2747
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Geob_2747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACM21096
UniProt:
B9M1L4
LinkDB
All DBs
Position
complement(3011821..3013161)
Genome browser
AA seq
446 aa
AA seq
DB search
MSFDSLGLRVELLTAIASQGYTMPTPIQTQAIPVIFEGCDLLAGAQTGTGKTAAFALPIV
QMLGENIPPEKRRRPRALVLVPTRELAAQVSEQMNNYARRLSLRSTMIYGGVNIQAQIER
LHRGVDIVVATPGRLLDHAERGTVNLSRIKFLVLDEADRMLDLGFIDAIQKVAEYLPVKR
QTLLFSATYSQSIKQLADELLNKPRRIEVARSNIAADAVTQAIYQVEKSRKREMLSFLIS
RGKWNQVLVFARTRYGADKLTEELLYDGIKAAAIHSNKSQSIRNRTLAEFRRGEFRVLVA
TDVAARGLDIEQLPHVVNYDLPQVPEDYVHRIGRTGRAGKEGIALSLVSHEEQPLLKAIE
KLLKYAIPLQTLAEFPQYAVKRSGANKIKSDKGPSKARKREAIPAKQAKSPAKESKSPSK
ASSLSRKKAAIERPAPKLGRRRSRER
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgattctctcggcctgcgcgtcgaactgttgactgccattgccagccagggg
tacaccatgccgacccccatccaaacacaagcgatcccggttatctttgagggatgcgac
ctgcttgccggcgcccagaccggcaccggcaaaacagctgcctttgccttgccgatcgta
caaatgctgggcgaaaacattcccccggaaaagcgtcgtcggccacgcgccctggttctg
gttccaacccgcgagttggctgcccaggtcagcgaacagatgaacaactacgcccggcgc
ctgtcgcttcgctccaccatgatctatggcggagtaaatattcaggcccagatcgagagg
ctgcaccgaggagtcgatattgtcgtcgccacgcccgggcgactgctggatcatgcggag
cgggggacggtaaacctttcccggatcaagttcctggtccttgacgaggccgaccggatg
ctcgatcttggattcatcgacgccatccagaaagtggcagagtatctgccggtgaaacgc
cagacgctgctcttttcggccacctattcccaaagcatcaagcagcttgccgacgaactg
ctcaacaagccgcggcgcatagaggtagcgcgcagcaatatcgctgccgacgctgtgacc
caggcgatctatcaggttgaaaagagccgcaagcgggagatgctttcgtttctcatcagc
agggggaaatggaaccaggtactggtctttgcccgcacccgctacggcgcagataaactg
accgaagaattgctctatgatggaataaaggctgccgccatccacagcaacaagagccag
tccattcggaaccgcaccctggccgaattcaggcgtggcgaatttcgcgtgttggtagca
accgacgtggcagcccgcgggctcgacatcgagcagctgccccatgtggtaaactacgac
cttccccaggttccggaagactatgtgcatcgcatcggccgtaccggccgggccggaaaa
gaagggatagccctttcgctggtgagccatgaagaacaaccgctgctgaaggcaattgag
aagctcctcaagtatgccattccgctccaaacgctggcggaatttccccagtatgcagtc
aaacggagtggcgccaacaaaatcaagtcggacaagggaccatcaaaggccaggaagaga
gaggcaataccggcgaagcaggcgaaatctccggcaaaggagtcgaagtctccatcgaaa
gcctcttctctcagccggaaaaaggccgccatagagcgccccgctcccaagctcggtcgg
cggcgaagcagggagcggtag
DBGET
integrated database retrieval system
