Geotalea daltonii: Geob_3293
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Entry
Geob_3293 CDS
T00846
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
geo
Geotalea daltonii
Pathway
geo03030
DNA replication
geo03430
Mismatch repair
geo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Geob_3293 (dnaE)
03430 Mismatch repair
Geob_3293 (dnaE)
03440 Homologous recombination
Geob_3293 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geo03032
]
Geob_3293 (dnaE)
03400 DNA repair and recombination proteins [BR:
geo03400
]
Geob_3293 (dnaE)
Enzymes [BR:
geo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Geob_3293 (dnaE)
DNA replication proteins [BR:
geo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Geob_3293 (dnaE)
DNA repair and recombination proteins [BR:
geo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Geob_3293 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACM21636
UniProt:
B9M4V2
LinkDB
All DBs
Position
complement(3616606..3620076)
Genome browser
AA seq
1156 aa
AA seq
DB search
MSQPDFVHLHLHTQYSLLDGAIRLGDLIKKVKGYEMPAVAITDHGNMFGAIEFYTKCKDK
GIKPIIGSEVYIAPGSRFSKESGNGHESTSSYHLVLLCQNLQGYRNLSWLVSAGYKEGFY
YKPRIDKEILAEHSEGLIALSACLKGEVAYQCGRNRIEDAVATARWYSELFPGRYYIELQ
ENTLPEQDVANKRLLEVASELSLPLVATNDCHYLNREDAKAHEVLLCIQTGKTMNDPNHM
HFSAEEFYFKSPQEMAAAFHYAPEAIANTVRIAESCDFELDFKTYHFPQYIKPADKSLDD
VLEEQAYEGLKDRLVAVRAKYPDLTADQEKGYYDRLRIELDCIKQMGFPGYFLIVADFIN
WAKDHGIPVGPGRGSAAGSLVAYSIRITDLDPIPYNLLFERFLNPERISMPDIDVDFCQD
RREEVIQYVTEKYGRDKVCQIITFGTMAARGVLRDVGRALDMSYGDVDRIAKLVPEVLGI
TLEKALQQEPKLNELAEADPRIKELLDVALCLEGLARHASTHAAGVVVAPDVLEAFCPVY
KDQKNGSITTQYSMKYVEKIGLVKFDFLGLKNLTVIHNAVKLIRAGKNADFDITVLRDDD
EETYKLLQSGNTTGVFQLESSGMQGLLVKLKPSCFEDIIAVCALYRPGPLGSGMVDDFID
RKHGRKKVVYDLPQLEPILKDTYGVIVYQEQVMQISRVLAGYSLGQADLLRRAMGKKDPE
VMAKEKIPFLAGAEKQNIDPKKAEAIFDLMAKFAEYGFNKSHSAAYALVAYQTAYLKTHY
PVEFMAALLTEDMGSTDKVIKNISDCRDMGIEVLPPDINASDLSFRVLGNSIRFGLGAVK
NVGESAIEAILEARKTGSFADIFDFGERVDQRKVNKRVVESLIKCGAFDSTGAKRAPLMA
GLEDAMSLGQKIQQERESAQVSLFGVEEMTRGNGNGKGSLPDLPEWDDKFLLNQEKEALG
FYITGHPLDRYSAQIRRFASVHTSDFAEIKDKAEVKICGIVVAKKEFITKKGDRMAFVTL
EDLHGTVEVVVLAKVYSRVAECLAGDDPILVSGTVEVGEKNIKVIASDVVLLRELTERET
RRVHVTVQSGIAREQLESLKGIIKRYPGSCRSYLHIVIPEQSRTTINLPDTCMLSASEDL
SLEVKNLLGYNAVSFE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccggatttcgtacatcttcatctgcatacccagtattcgctgctggacggc
gccattcgcctcggtgacctgatcaagaaggtcaagggctatgagatgcctgccgttgcc
attaccgaccacggcaacatgttcggcgccatcgagttctataccaagtgcaaggacaag
gggatcaagccgatcatcggcagcgaggtttatattgctcccggctcccggttcagcaag
gagagcggcaatggccacgagtctacttcgagctatcatctggtcctgctctgccagaac
ctgcagggctacaggaacctttcctggctggtctcagccggttacaaggaggggttttac
tacaaaccgcgcatcgacaaggagatactggctgagcacagcgaagggttgatagcgctt
tccgcctgcctcaaaggggaggttgcctatcagtgcggccgtaaccgaatcgaagatgcc
gttgccacagcccgctggtattccgagctttttcccggccgctattacatcgaactccag
gaaaacacccttccagagcaggatgtggccaataagcgcctgctggaagtggcctcggag
ctttcactgccgctggttgccaccaacgactgtcattaccttaaccgcgaggatgccaag
gcccacgaggttttgctctgcatccagaccggcaagacaatgaacgatccgaaccacatg
cacttttcggccgaggagttctacttcaagtccccccaagagatggctgctgccttccat
tatgcgccagaggccattgccaatacggtgcgcattgccgaaagctgcgactttgagctt
gacttcaagacctatcactttccccaatacatcaagccggcggataaaagccttgatgat
gtcctggaggagcaggcctatgaagggctcaaggatcggctggtggcggtgcgggccaaa
tatccggacctgacggcggatcaggaaaagggttactacgaccggctcaggattgagctc
gactgcatcaagcaaatgggctttcccggttatttcctcattgttgccgacttcatcaac
tgggccaaggaccatggcattcccgtcggcccgggacgcggttcggcagccggttcgctg
gttgcctactccatccgtatcaccgatctggaccctattccttacaacctgctcttcgag
cggttcctcaatccggaacgtatatccatgcctgatatcgacgtggatttctgccaggac
cgccgcgaggaggtgatccagtacgtcaccgagaagtatggccgggacaaggtctgccag
atcatcacctttggtaccatggctgctcgaggcgtgctccgcgatgtgggccgggcgctg
gacatgagctacggcgatgtggaccgcatagccaagctggtgcctgaggtcctgggcatt
accctggaaaaggccctgcagcaggagccgaaactgaacgagctggccgaggccgatcct
cgcattaaggagttgctggatgtggctctttgcctggaagggttggcaagacacgcctct
acacacgcagccggtgtggttgtggcgcctgacgtgctggaggctttctgcccggtctac
aaggatcaaaagaacgggtcaataaccacccagtactcaatgaagtacgtggaaaagatc
ggcctggtaaagttcgactttttgggcctcaagaaccttacggtcatccacaatgcggtg
aaactgatccgcgccgggaaaaatgccgatttcgatatcactgtcctgcgcgatgatgac
gaggagacctacaagctgctccagtccggcaacaccactggcgtattccagcttgaatcc
tccggcatgcagggactgctggtcaagctgaagccatcctgtttcgaggacatcatcgcg
gtttgcgccctttaccgtcccggccctctgggcagcggcatggttgacgacttcatcgac
cgaaagcatggccgcaaaaaggttgtctacgacctgccgcaactggagccgatcctgaag
gacacctatggggtcatcgtctaccaggaacaggtcatgcagatctcccgcgtcctggcc
ggctattccctcggccaggccgacctcctgcgccgcgccatgggtaagaaagaccccgag
gtcatggccaaggagaagatcccgtttctggcgggggcggaaaagcagaatatcgatccg
aaaaaggccgaggccatcttcgacctcatggccaagttcgccgaatacggcttcaacaag
tcccactccgccgcctatgccctggtggcctaccagaccgcctatctcaagacccactat
ccggtagagttcatggcagccctcctcaccgaggacatgggcagtaccgacaaggtcatc
aagaacatcagcgactgccgggatatggggatcgaggtgctgccccccgacatcaacgcc
tccgatctttccttccgggtcctgggaaattccatccgctttggtctgggggcggtgaag
aacgtgggtgaatctgccatcgaagcgatactggaggcgaggaaaacgggttctttcgcc
gatatcttcgattttggcgagcgggtggaccagcgcaaggtcaacaagcgggtggtggaa
tcattgatcaaatgcggcgccttcgattccaccggcgccaagcgggcgccgctcatggcg
gggctggaagatgccatgtccttggggcagaaaatccagcaggagcgggagagtgcccag
gtttcacttttcggtgtcgaggaaatgaccagggggaacggcaacggcaagggaagcctg
cccgacctgccagagtgggatgacaagtttctcctgaaccaggaaaaagaagccctcggc
ttttacattaccgggcatccccttgatcgctattctgcccagatcaggcgttttgcttcc
gtccatacctccgattttgccgagatcaaagacaaggccgaggtcaagatctgcggcatc
gtcgtggccaaaaaggagttcatcaccaagaaaggtgaccgcatggccttcgtcaccctg
gaagacctgcatggcacggtggaggtggtggtgctggcaaaggtctacagtcgggttgcc
gagtgtctcgccggcgatgaccccatcctcgtcagcggcacggtggaagtgggcgagaaa
aatatcaaggtcattgccagcgatgttgtactgctcagggagttaaccgagcgggagacg
cgccgtgttcatgtgacggtgcagtcaggtattgcccgtgaacagcttgaatccctgaaa
gggatcatcaaacgctatccgggttcctgcagatcctatctgcatatcgtcattcccgaa
caatccaggaccaccatcaatcttcccgatacctgcatgctgtctgcctctgaagattta
tctctggaagtaaagaatctgctgggttataatgccgtttctttcgagtag
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