Geotalea daltonii: Geob_3309
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Entry
Geob_3309 CDS
T00846
Name
(GenBank) squalene cyclase domain protein
KO
K20276
large repetitive protein
Organism
geo
Geotalea daltonii
Pathway
geo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Geob_3309
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
CarbopepD_reg_2
SpaA
EMC7_beta-sandw
PEGA
TTR_TEN1-4
SdrD_B
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
DUF3869
Motif
Other DBs
NCBI-ProteinID:
ACM21652
UniProt:
B9M4W8
LinkDB
All DBs
Position
complement(3638595..3644435)
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AA seq
1946 aa
AA seq
DB search
MDPQRSLILSHRRFAFAMKGLMLFLLSAIALLIPPDNTFANDFNAVWLGDFGNVTAMEVT
GNYDAKNTDGTVNSDARAVIAREFYKTHKDEYDFLVIVSNFDFKMPETEARAFYMGVKND
TRGIGEELFDNTSLFGSGGRLQGTIDMGNLAYIATDPYSPDFENTFYIMNHEMMHRWGAR
VKFKAADGTTSSALLGKDGSHWSFLLDSQRSVLYGNTWHDNGDGTFTAQEGGKYFSPLDL
YLMGIYDKSRVPPITLIENPAIDANQVPKPGTTISGIPRYVTIDDIIAVEGERIPSASQS
QKKFNMAVIFITTPGSFTGDETNALENLLRGVATRYSILTDAAALLSATPAPIEEVADNP
GLFPEQGTKRTAAANVDEGAAWLVAAQKEDGSWATDLRLTERETSEAVTVLRNFATGTSA
AARGLQWLTANGNGNTDYLATRIAALADAGQIPATLLAELLARQNGDGGWGSDRNYSSNP
VDTALALKALVAAHTTGIAVENGKTFLIARQNPDGGWGFHADAASAVLVTAQVSATLQRL
PSNSLLATVIRKATTFLLSHQNVDGGFGSSPSTVYETALAYGALSGDITDMTILGLAASY
LSSTQLEDGSWLQDPYTTALAVEALYNFARRPPPTPPTTKGTITGTVTDATTHQALAGVS
VTLASDPAITAMSTSNGSFTLADVPQGSQSIVVSLNDYGQLTRTMTVTAGAISDLGPLEL
APNPVTGIIKGTLTAAATGLPLSGVSVTVTGAYQGNAVTGTDGAFVIGNVSPGSVTISAS
KTGYEQVATTGTVVAGQVLFFNPQMKTPVSVPLVGSVTGKVFDAATKQPLSGAFVALQAD
PGITATTDPTGTFTLSGIPQGGQKLNFTLSGYAPTSAAVGVVGGSTVNLGVVTLSLTPTA
STVKGVLVDGSTDQPLPGVVVTMTGVFSGTTVTGADGSFAVSGVSPGALTVTGAKSGFYP
ASMTGVVPVGGVLYLNARLTAIPPQPTTGTVTGKVVDAASKLPLTGAVVTLGSNGSIKAT
TDASGSFTLTAIPAGSQQLEVTLTGYASGTAAVEVAAGALLNLGDLPLSLNPTSAVIKGT
ITNAADGQALAGVTVAVTGSFNGTAITGADGTYLFPEVTPGSVTVTASKAGYFQATGSGS
ISAGGLLLFTPQLVLIPPQPDTGTITGRVVDATTKEALSGVVLTLQNDSAVRTVTDATGS
FLLSNIPVGDQAVDFSLPGYSAAVAKITSTAGFSLDLGTLPLSSNPTTGVLKVTVSDAAT
GKAIEGATITVDGAGLTGISGTDGSFLFPELITGDRTLSVVKNGYYPTTGTVTLMAGWIL
SLNTQLQAIPAQPTTGTLIGRVVDAVDSHPLSGVTVTLAGDPPVVVNTDSAGGFSLPDVT
PGSHTVDFSLSGYMTSRVTLDMIAGVILDLGSLPLASSATTGFIKGVVTDGSTNLPLSGA
TVTVSGSFSGSTVTQADGSYAFSQATPGPVFIAITKAGYYPQTGTGTVQAGGMLVSNGAL
KELPPAGSTGEFTGVVVDAMTNLPIPGATITVVGEISVNTDADGVFHASRVVPGARYVTI
SAADHVSLNYTVIVVEGITTNIQTVYLTPLLESSAVAGVVSDLLTGNPIEGAEVTVAGTS
LSARTDSNGAYSISGITLLDFSLRAGVTGYDSLLQSVSSAANGFYRVNFPLNPSQASSLS
IASLKTDSQSYPAYSAVSIQAEVLNMGTLAIAGTVSVTILDADGQVTDNLLATAADDNGV
QNSLIWFEPGVPKVITIPWETGNRQPGIYRAVLKVTEGETGISFGTVVAAKGATLFTVAP
TQAVASLTLTPLPRFANFNATEQIALLASLVNRSNVPIELAVAYQWLSPSGGVLHSGTGT
ISVLPGEGSKSLQLETFPFTFTQSGVHPVQVTLQSGPMPAVFTGEAVTVAPGTHIEPTQQ
LTPAKVTPDGDKRLRINIHLKGEVLK
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcaacgctcattgatactgtcgcaccgtcggtttgccttcgcaatgaagggc
ctgatgctctttttgctgtcggcgatcgctttgctcattccccctgacaacacctttgca
aacgatttcaatgccgtatggctgggtgatttcggcaacgtgaccgccatggaggtgacc
gggaattatgacgccaaaaacaccgatggcacagtcaattcggacgccagggcggtaatt
gccagggagttttacaagacccacaaggatgagtacgacttcctggtgattgtcagcaac
ttcgacttcaagatgccggagacagaggcgcgggccttttacatgggggtgaagaacgat
acccgcggcatcggcgaggaactgttcgacaatacgagcttattcggcagcggtggcagg
ctccaggggacgatcgacatgggaaacctggcttacatcgctaccgacccttacagcccc
gatttcgagaacaccttctatatcatgaaccacgaaatgatgcatcggtggggggcgcgg
gtaaaattcaaggctgccgacggcactaccagtagcgcccttctcggtaaggacggcagc
cactggagctttctcctagattcccaaaggtctgtcctctacggcaacacctggcatgat
aacggagacgggacatttaccgctcaagaagggggcaaatacttcagcccgctcgatctc
tacctgatgggtatttacgacaagtcgcgcgttccccccattacgttgatcgaaaatcct
gcgatcgatgccaaccaggttccaaagcccgggaccaccatcagcggcatcccccgttat
gtcaccatagacgatatcattgccgtagagggtgagcggataccgtccgcttcgcagtcg
caaaagaagttcaacatggcggtgatttttattaccacccctgggagtttcacgggtgat
gagaccaatgcgctggagaacctgttgcggggggtggcaaccagatattcaatcttgacc
gatgctgctgcgcttttgtcggcaacgccggcgccgattgaagaggtggctgacaatccg
gggcttttcccggaacaaggtaccaaacgcacggcagcggcaaatgtcgatgaaggtgct
gcctggttagtggctgcacagaaggaggacggcagttgggccaccgatctccggcttacg
gaaagggagacctcggaagccgtgaccgtactgaggaatttcgccaccggcacatcggcg
gcagcccgtggtttgcagtggctgactgccaatggcaacggtaacactgattatctcgcc
accagaattgcggcgctggcggatgccggacagattcccgcaacactacttgccgaactg
cttgctcgacagaatggggatggtggttggggaagcgacagaaactattccagtaatccg
gtcgataccgccctggcattgaaggctctcgtggctgcgcatacgactgggatcgccgtt
gaaaacggcaaaacgttccttattgccaggcagaatcctgacggcgggtggggcttccat
gccgacgcggccagtgccgtcctggtaacggcccaggtctcggccacgctgcaaagactg
ccgtccaacagcctcctggcgacagttatcaggaaggcgaccacattcctgttgagccat
cagaacgtggatggaggtttcggtagttccccttcaacagtatatgaaacggctctcgct
tatggcgcgttgtccggagatatcacggatatgacgattctgggcttggcggccagctac
ctgtcctcgacacagttggaggatggatcatggctgcaggacccttacacgactgcactg
gcggtggaggcattatacaacttcgccaggagaccgccgccaacgccccctacgaccaaa
ggcaccatcacaggaacggtcaccgatgccactacccatcaggctcttgccggcgtgagc
gttacgttggcaagcgatcccgccattactgcaatgtcgacctctaatggctctttcact
cttgccgatgtcccacagggttcccagtctattgtcgtctcgctgaacgattatgggcaa
ttgacccgcacgatgacggttacggcgggagccatttcggaccttggccccctggagctg
gcgccaaaccctgtaaccggcattatcaaaggaactttgacggccgcggcaacaggtctt
cccctatcgggggtgagcgtgactgttaccggcgcctaccaggggaatgcagtgaccggt
accgatggcgcattcgtgatcgggaatgtttccccgggaagcgtcaccatttcagcctcc
aagacgggatatgagcaggttgccactaccgggaccgtggtggccggacaggttctcttt
ttcaatccgcagatgaagacgccggtttccgtgccattggtcggttcagtgactggtaag
gtattcgatgcagcaacgaaacagcccctgtcgggtgcctttgtggcactgcaagccgat
ccggggatcactgcgaccaccgatcctaccggcacgtttaccttgtcgggcataccgcaa
ggtggccagaagctcaattttaccctctcgggttatgcccccaccagtgcggcggtgggc
gttgtggggggatctaccgtaaatctgggagtggtgactctttcgctaaccccgaccgcc
agcacggttaaaggggtactggtcgacggctccaccgaccagccgctaccaggggtagta
gtaaccatgaccggcgttttcagcggcactacggttacgggagccgatggcagctttgcg
gtgtcgggtgtttcacctggtgcgctgaccgtaaccggggcgaagagtggcttttatcct
gcatccatgaccggggttgtgcctgttggcggcgtgttatacctgaacgcccgcttgacc
gcgattccaccgcaaccgactaccgggaccgtgaccggaaaagtggttgatgcagcaagc
aaactgccgctgactggcgctgttgtgactcttggcagcaatggctcgatcaaagcgacc
accgacgcttcaggtagttttactctcacggccataccggctgggagtcagcagctggag
gtgaccttaaccgggtatgcttcagggaccgcagccgtagaggtggcagccggagctctg
ctcaatctcggggatctgccgctctctctgaatccgacgtcggccgttataaaaggcacc
atcaccaatgccgccgatgggcaagcgctggcaggagtgaccgttgccgttaccggctcc
ttcaatggcacagccataaccggtgctgacgggacttacctctttccggaggtcactccc
ggaagcgtgactgttactgcatctaaagccggatatttccaggctacagggagtggatcg
atttccgcaggtggcttgctgctgttcactccgcagctggtcctgataccgcctcagccg
gacacaggtaccataaccggcagggtggtggacgccaccacgaaggaagcgttaagtggg
gtcgtgctgaccctgcaaaatgattcggctgtccgtaccgtaacagatgccaccggcagt
ttcctgttgagcaatatcccggtcggtgaccaggctgtggatttttccctgccgggatat
tcggcggctgtcgcaaagatcaccagcacagccggtttttccctggatctcggcacgctc
cctctctcttccaacccgaccaccggcgtgctgaaagtgacggtgtccgatgcggcaacc
ggcaaggcgattgaaggggcgaccatcacggtcgacggagccggcctgacaggcatttca
ggaaccgatggcagcttcctctttccggaacttattacaggagaccggaccctgagtgta
gtcaagaacggctactatcccacgacaggtacggtaactctcatggcaggatggattctg
tctctgaacactcaactgcaggcgataccagcccagccaactaccggcactctcattgga
cgagtggtggatgcggtcgatagtcatcccttgagcggcgtcaccgtgaccttggccggt
gatcccccggtcgtggtgaacaccgacagcgcaggcggcttctcgctaccggacgttact
cccggtagccataccgttgatttcagcctctccgggtacatgacgagccgcgtgaccctc
gacatgatcgccggcgtgatcctcgatctcggcagcctgccacttgcctccagcgctacc
accggattcatcaagggtgtcgtcaccgacgggtctaccaatctgccgctttcgggggca
acagtcacagtcagcggctcctttagcgggagcaccgtcactcaggcagacggctcctat
gccttttcccaggcaacacctggtcctgtgttcattgccattaccaaagcgggatattac
ccgcagacggggaccggcacggtgcaggcaggagggatgctggtcagcaatggggccttg
aaggaattgccccctgcaggcagcacaggggaattcaccggtgttgtggtagatgccatg
accaatcttcccatccccggtgcgaccatcactgtggttggggaaatctcggtgaatacc
gatgcggatggggtctttcatgccagccgtgttgtccccggcgcacgctatgtgaccatt
tccgcagctgatcatgtcagcctgaattacactgtcatcgtagtggaagggataactacc
aacatccagaccgtctaccttacccccctgctggagagttcggctgtagccggtgtggtc
agcgaccttttgaccggcaacccgattgaaggcgccgaggtgacggtggcgggtaccagc
ctctctgccagaaccgacagtaacggcgcctacagcatctccggtattacgctgctggac
ttctcattgagagccggcgtcaccgggtacgactccctgttgcaaagcgtctcctcggca
gccaacggattctaccgggtgaacttccccctgaaccccagccaggcgagctccttgtcc
atagcttcgctcaaaacggatagtcagagctatcccgcgtactcagcggtctccatacag
gcggaagttcttaacatgggcaccctggcaatcgctggcaccgtgagcgtgaccatactc
gatgccgacgggcaggtaacggataatttgctggcaacggccgccgatgacaacggggtg
cagaattccctgatatggttcgaaccgggggttccgaaggtgatcactatcccatgggag
accggcaaccgacaaccgggcatttatcgggcggtgctgaaagtcaccgaaggggaaacg
ggcataagcttcgggacggtggttgccgccaaaggcgcgactctcttcacggtggctccg
acccaggcggtggcaagcctgaccctgacgccgctgccgcgttttgcaaactttaacgca
accgagcagatagcattactggcaagcttggtgaaccgctcgaacgtccccatcgagctg
gcagtcgcctaccagtggctgagcccaagcggaggcgtgctgcacagcggcaccggaacc
atttcggtactgcccggcgaagggagtaaatccctgcagctggaaaccttcccctttacc
ttcacgcagagcggtgtgcatcccgtacaggtgacgctgcaaagcggaccgatgcctgcg
gtttttaccggagaagccgttacggtggcaccgggcacccacattgaaccgacacagcag
ttgacgcctgcaaaggtgacccctgacggcgacaagcgtctgcgtataaacatccatctg
aagggggaggtgctgaaatga
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