Geotalea daltonii: Geob_3370
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Entry
Geob_3370 CDS
T00846
Symbol
pilR
Name
(GenBank) sigma-54-dependent transcriptional response regulator PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
geo
Geotalea daltonii
Pathway
geo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Geob_3370 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
geo02022
]
Geob_3370 (pilR)
02035 Bacterial motility proteins [BR:
geo02035
]
Geob_3370 (pilR)
Two-component system [BR:
geo02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Geob_3370 (pilR)
Bacterial motility proteins [BR:
geo02035
]
Pilus system
Twitching motility proteins
Geob_3370 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
AAA_16
AAA_2
IstB_IS21
bpMoxR
MCM
Mg_chelatase
AAA_PrkA
HALZ
ATPase
AAA_3
FleQ
TIP49
nSTAND3
DUF815
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACM21713
UniProt:
B9M529
LinkDB
All DBs
Position
complement(3723132..3724505)
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AA seq
457 aa
AA seq
DB search
MAATIMVVDDEQSMREFLVILLEREGYAVQQCESAACALSLLQSSGFDLVISDVNMPGLN
GMELLERIKSTTPETAVLMITAYTTAEQAVEAMKLGAYDYIAKPFKVEEVKVLVKNALEK
SSLQKENRRLKHEVQELYGFSGLIGKSKKMRELYDLIEKVSSSTVNVLILGESGTGKELV
AKAIHYNSSRSGKPFVAVNCGAIPETLIEAELFGHKKGSFTGAIADRAGLFEQAEGGTLF
LDEIGELPLQLQAKLLRVLQEREYRRVGGATALKADVRIIAASNRDMEQQVREGSFREDL
FYRLNVVPVNMPPLRERTEDILPLVEHFYFKLTQSADTAGAISPEALKALMNYSFPGNVR
ELENLVERCLVLGNTTITEVSLPCQVLNDKRTEPAAGDIEFSAEGINLEAHLDSIEKRFL
TQALTKSNGVKTKAASLLGLTFRSFRYRLAKFGMDEE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaactatcatggttgttgatgatgaacagagcatgcgagagtttctcgtgatc
ttgcttgagagagaagggtacgctgtccaacaatgtgagagtgctgcctgcgctttaagt
ctccttcagagcagcggctttgatctggttatttccgatgtaaatatgcctggacttaac
gggatggagctcctggagcgaatcaagagcactactcctgagacggcagttttaatgatt
actgcctatactacggcagagcaggcagtggaggcaatgaaactaggggcctatgactat
attgccaagcctttcaaagttgaagaagtgaaggtgctggtaaaaaatgctctggagaag
agcagcctgcagaaggaaaaccgccgattgaaacacgaagtgcaggaactctacggtttc
agtggtctgatcggcaagagcaaaaaaatgcgggaactgtatgacctgatcgagaaggtt
tcatccagtacagttaatgttttgattttaggtgaaagcggcacaggcaaagagcttgtg
gcaaaggcaatccattacaacagctcccgtagcggcaagccttttgttgccgtcaattgc
ggggccattccagaaacactcattgaggctgaactcttcggacataaaaaaggctccttt
actggggccatagctgatagagcaggcctgttcgagcaggcggaaggcggcacgcttttt
ctcgacgaaataggggaactacctctgcagttgcaggccaagctactgcgtgtcctgcaa
gagcgggagtatcgacgtgtcggaggggcaacggccttaaaggctgatgtcagaataata
gcggcttctaaccgtgatatggagcagcaggtgagagaaggttcttttcgcgaggatctg
ttctaccgattaaatgtagtgcctgtgaacatgccgccattgcgcgaacgaacagaggat
atcctgccgctcgtggaacatttttacttcaaacttactcaatccgcggacactgctggg
gccatctcgccagaagctctgaaggccctcatgaactactctttccccggaaatgttcgg
gaattggaaaacttggtagagcggtgtcttgtattgggaaacacgacaatcactgaagta
tccttgccgtgccaggtgctgaacgataagaggacagagcccgctgctggcgatattgaa
ttttctgctgaaggtattaaccttgaggcccatctagatagtattgagaaacggtttcta
acgcaagccctcacaaagagcaacggggttaaaaccaaggcggcgtccctccttggattg
acctttagatccttccgttatcgcttggctaaattcggaatggatgaggaataa
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integrated database retrieval system
