Geotalea daltonii: Geob_3529
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Entry
Geob_3529 CDS
T00846
Symbol
yhaM
Name
(GenBank) 3'-to-5' exonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
geo
Geotalea daltonii
Brite
KEGG Orthology (KO) [BR:
geo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geo03019
]
Geob_3529 (yhaM)
Messenger RNA biogenesis [BR:
geo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Geob_3529 (yhaM)
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
ACM21870
UniProt:
B9M682
LinkDB
All DBs
Position
complement(3916600..3917715)
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AA seq
371 aa
AA seq
DB search
MKKFVSEIKDRDQVDSVFLVKEKITAMAKNGKPYLTLRLMDKTGEVDAKIWDNVDQISML
FDKDDFLSVRSKASVYLGKMQLIISELSKVPEESVTLADFLPETERNIKEMENELFSLVE
SVSDINLKSLLNAFFRDTELFSLYRVAPAAKGMHHVYLGGLLEHSLAVAKLVDSIVPLYS
GLNRDLLITGALLHDVGKVREMTYMRAFDYTDEGKLIGHITIGVEMLQEKIMTITGFPVE
LAMLLKHMLLSHHGQYEFGSPKRPKTIEATILNYLDDLDSKINGIKTHIKKETASDSRWT
AYHRLYDRYFFKNNGHEEPEMEIESVVETPAEAQPLQAKSVQPREGKHGFHNSPFTQLKE
ENLDLFQLPKG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaatttgtttctgaaataaaggatcgcgatcaggtggattccgtttttctggtc
aaggaaaagatcactgccatggccaaaaacggcaagccttacctgacgttgcgcctgatg
gataaaaccggcgaggttgatgcgaagatctgggataatgtggatcagatcagcatgttg
ttcgacaaggatgatttcctgtcggttcgttccaaggcatcggtttacctggggaagatg
cagctgatcatttccgagctgagcaaagtgccggaggagagcgtcaccctggcggacttt
ctgccggagacggaacggaacataaaggaaatggagaacgagctcttctcgttggtcgaa
tccgtctccgacatcaatctgaagagcctgctcaatgcgttcttcagggataccgagctc
ttctccctttaccgggttgctccggcggcaaaagggatgcatcacgtatacctgggtggt
cttctggaacattcccttgccgtagccaaactggtagacagcattgttcccctgtattcg
gggctcaaccgcgatctgctcataaccggtgcactgctccatgatgtgggcaaggtgagg
gagatgacctatatgcgcgctttcgattataccgatgaaggcaagctcatcggccacatc
accatcggcgtcgagatgctgcaggagaaaatcatgaccatcaccggttttcccgtggaa
ctggccatgcttctcaagcacatgctcctttcccatcatggccagtatgagttcggttcc
ccgaaacgtccgaaaaccatcgaggctacaattctcaattacctggacgacctggattca
aagatcaacggcatcaagacccacatcaaaaaggaaactgccagcgactcccgctggaca
gcctatcaccgcctctatgaccgttattttttcaagaacaatggccatgaggagcctgag
atggagattgaatctgtggtggagactccggcggaggcgcagcccttgcaggcaaaatct
gtccagccaagggaaggaaagcatgggtttcacaacagccccttcactcagcttaaagag
gagaatctcgacctgttccagttgccaaagggatag
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