Geothrix sp. PMB-07: Q9293_00005
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Entry
Q9293_00005 CDS
T09655
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gep
Geothrix sp. PMB-07
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gep03032
]
Q9293_00005 (gyrA)
03400 DNA repair and recombination proteins [BR:
gep03400
]
Q9293_00005 (gyrA)
Enzymes [BR:
gep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Q9293_00005 (gyrA)
DNA replication proteins [BR:
gep03032
]
Prokaryotic type
DNA Topoisomerases
Q9293_00005 (gyrA)
DNA repair and recombination proteins [BR:
gep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q9293_00005 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WLT31718
LinkDB
All DBs
Position
join(4241275..4242863,1..1018)
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AA seq
868 aa
AA seq
DB search
MNQNRIEPLEIEKEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKEAGNDWNRA
YKKSARTVGDVMGKYHPHGDSAIYDTLVRMAQPFSMRHVLVDGQGNFGSIDGDSAAAMRY
TEARLSRLANEMMADIEQDTVDFGPNYDGSMEEPLTLPARFPNLLVNGSQGIAVGMATSI
PPHNLRECCNALVNLIEQPGLPLEGLMAHIKGPDFPGGGLMLGTEGVLDAYRTGRGRCVV
RAKSHVEQIKRAGDREQIVFTELPYQVNKSTLIEKIAELVRDKKIDGISDLRDESDREGI
RLVVELKKNEPSDIVLNQLYQQTQLQNSFPITMLAIVNGQPRICTLREVLQEFIGFRREV
VTRRTLFQLRKAEERHHVLMGLKIALDHLDAVIKLIRAAKSPEEAKAGLMAGAFATAAAI
KKDPTLCLSAIQAQAILDMRLQRLTGLEREKILDELAELEKVIAKLKAILADEKLLLKVI
KEEFQQVADQFGNDRRTEIVGYTGEIRMEDVVPDDPMVVTMSKAGYIKRTDLTAYRRQRR
GGKGKVGMKTKDEDFVEQLFMTKAHDTLMAFTDKGIVYALKVYDLPEAAASTRGKHIKNL
ISLKDGESVVTLMALRDFPEGENLVFATADGTVKKSSLAAYANIRANGLIALNIDEGNSL
VAVRRSNGSQQIVLATAQGKAIRFPEEDVRATGRATTGVRGMKLAAKDHIVDMEVADPLP
DLPEGVEPDESTEDHGMLLTVCEKGYGKRSLVQDYRLQGRGGTGVINIRAGVRNGQVVGF
KLVKPGEGCLLISQEGMVIRFLIDEVRKTGRNAQGVGLLKLASPDDRVVGLAKIDASAMA
LDEEEELGEAEVAHPGPDEGGEQPKLDL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaccgaatcgagccattggaaatcgaaaaagagatgcggaagtcctacctg
gactacgccatgagcgtcatcgtgggtcgggccctgcccgatgtccgcgacggcctcaag
cccgtgcatcgccgcgtgctcttcgccatgaaggaagcgggcaacgactggaaccgggcc
tacaagaagtccgcccgcaccgtcggcgatgtgatgggtaagtaccatccgcatggcgac
tccgccatctacgacacccttgtgcgcatggcgcagcccttctccatgcgccacgtcctg
gtggatggccagggcaacttcggctccatcgacggcgactccgcggcggccatgcgctac
accgaggctcgcctgtcgcgtctggccaacgagatgatggccgacatcgagcaggatacg
gtcgacttcggccctaactacgacggcagcatggaggagcccctcacgttgcctgcccgg
ttccccaacctgctggtgaacggttcccagggcatcgccgtgggcatggccacgagcatt
cccccgcacaacctgcgggaatgctgcaacgcgctggtgaacctcatcgaacagcctggc
ctccctttggaaggcctcatggcccacatcaagggccccgactttccgggtggcggcctc
atgctgggtaccgagggcgtgctggatgcctaccgcacgggccgcggccgctgcgtggtg
cgtgcgaagtcccatgtcgagcagatcaagcgggcgggtgaccgtgagcagatcgtcttc
accgagctgccctaccaggtgaacaagtccaccctcatcgagaagatcgccgagctggtc
cgcgacaagaagatcgacggcatcagcgatctccgggacgaatcggatcgcgagggtatt
cgcctggtggtggagctcaagaagaacgagcccagcgacatcgtcctgaaccagctctac
cagcagacccaactccagaacagtttccccatcacgatgctggccatcgtcaatggccag
ccgcgcatctgcacgctgcgcgaggtgctgcaggagttcattggcttccgccgcgaggtg
gtcacccgccgcacgctgttccagctgcgcaaggccgaggagcggcaccacgtcctgatg
ggcctgaagattgccctggatcacctggacgcggtcatcaagctcatccgcgccgccaag
agccccgaagaggccaaggccggtctcatggcgggcgccttcgccacggccgcagccatc
aagaaagaccccaccctctgcctgtcggccatccaggcccaggccatcctggacatgcgc
ctccagcgcctgaccggcctcgagcgggaaaagatcctggacgagctggccgagttggag
aaagtcattgccaagctcaaggccatcctggccgacgagaagctgctcctgaaggtgatc
aaggaagagttccagcaggtggccgaccagttcggcaacgaccgtcgcaccgagatcgtc
ggctacaccggcgagatccgcatggaggacgtggtgccggacgatccgatggtcgtcacc
atgtccaaggccggctacatcaagcgcacggacctgaccgcctaccgccgccagcgccgc
ggcggcaagggcaaggtgggcatgaagaccaaggacgaggatttcgtcgagcagctcttc
atgacgaaagcccatgacacccttatggcttttactgacaagggcatcgtctacgccctg
aaggtctacgacctgcccgaagcggccgcttccacccggggcaagcacatcaagaacctg
atctcactgaaggacggcgagagcgtggtgaccctcatggccctcagggacttcccggaa
ggggagaacctcgtcttcgccaccgcggacggcaccgtcaaaaaatccagtctcgcagcc
tacgccaacatccgggcgaacggcctcatcgccctcaacatcgacgaaggcaacagcctg
gtggcggtgcgccgttccaatggcagccagcagatcgtcctggccacggcccagggcaag
gccatccgcttccccgaagaggatgtccgtgccaccggtcgcgccacgacgggggtgcgt
ggcatgaagctggcggccaaggaccacatcgtggatatggaagtggccgatccgctgccg
gacctgccggaaggcgtggagcccgacgagagcactgaggatcacggcatgctgctcacg
gtctgcgaaaagggctatggcaagcgcagcctggtgcaggactaccgcctgcagggtcgg
ggcggcaccggtgtcatcaacatccgcgccggggttcgcaacggccaggtggtgggcttc
aagctggtcaagcccggggaagggtgccttctcatcagccaggagggcatggtcatccgc
ttcctcatcgatgaagtgcggaagaccggccgcaacgctcagggtgtgggcttgctcaag
ttggctagccccgacgaccgggtcgtcggcctcgccaagatcgacgccagcgccatggct
ctggatgaagaagaagaattgggagaggccgaagtcgcccacccgggccccgacgagggc
ggcgaacagccgaagctcgacctgtag
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