Geothrix sp. PMB-07: Q9293_00580
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Entry
Q9293_00580 CDS
T09655
Name
(GenBank) PAS domain S-box protein
Organism
gep
Geothrix sp. PMB-07
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
HATPase_c
Response_reg
PAS
HisKA
PAS_7
PAS_8
PAS_9
PAS_3
Hpt
Receiver_CRE1
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
WLT31832
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All DBs
Position
complement(125007..128261)
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AA seq
1084 aa
AA seq
DB search
MLHSLLQRQLKRSGLDADALPEGSPLRDLLERISRSYAEADQDRYTLERSLAVSSEEMRT
LYEELKRTSESRLAESEQRYRSVVETVQEVIFHTDARGRWVFLNPAWKELTGFTVEESLG
SYYLDAVLPEDRESALAEVALSLRNPTRQSRHAVRFITRDGFRWVEVHARPLLDADGVLT
GASGTLNDIHDWREAEEQVQKQQRQLASILDTLPINIYLKDAEGRFLFVNEETCRTLGLP
AEAITGRTDEDVFPPDLAAQLRQEDLRVWESGELRTSEEAHHSPSGTRWFLAGKTLIQAH
TRHEALLLGFSLDITQRKQAENQAHTKERQLEDAIESLDSGFAMFDAEDRLVKCNQTYRD
LYPEIAPLLVPGTSHETLLTRYVQSGVNLGTGLTPEAWIQNRRRAHQNPTAPIERRIGNR
WVRISDRRTSDGGIVSLRTDVTRLKEQQDELRKAKDDAEAATRAKSDFLANMSHEIRTPM
NGVLGMTGFLLDTPLNPEQREHAETVHACASGLLEIINDILDFSKIEAGMLDLEILDFDL
RDCTDEVLAMFAVQAEAKGLDLACFLDPAIPSPLRGDPGRIRQILINLVGNAIKFTASGS
VTIHAFLQQREAEAVDIQFSLKDTGIGISKEAQARLFRSFSQADGSMTRRFGGTGLGLAI
CRQLVTMMGGEIQVDSGPGSGSTFTFSLRLETAPEAITVPNRLQGATVLWVGPPSATRET
TREQLQAMGLVLTVASSDAIKALDPRAFQIVLLQGDLPDGWETDQLPFIHVVPWSHPARH
ASHRATLVRPIRQRPLMAALAGALGFTPEPLTADTPSADLLAMPRQGRLLVAEDNPVNQK
VAVRYLERLGFRVDVAANGLEALEACARLPYDLIFMDCQMPEMDGFEATVALRSQESQAG
APRIPIVALTAHAMAGERARCLAAGMDDYLTKPLRLDELARVIQHWTQEPPMCPAPRDES
LPPRDLPQDMLDHATLQNLVELDDGGSGLLSELIEIFREDTPRRIHDILAAAAKGDALEF
SHAGHALKGGAGALGAAAMRRYAADIEALGRSGSVEAGPDLQADLERLFLDSLAALEAYA
AKLR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgctccattcccttctccagcggcagctgaagcgctccggcctcgacgccgacgccttg
ccggaaggcagtcccctgagggacctgctcgagcggatcagccgttcctacgccgaagcc
gaccaggaccgctacaccctggagcggagcctggctgtgtccagcgaggagatgcgcacc
ctgtacgaggaactgaagcgcacctcggaaagccgcctcgccgaaagtgagcagcgctac
cgctcggtggtggagaccgtgcaggaggtcatcttccacacagacgcgaggggccggtgg
gtcttcctgaatcccgcctggaaggagctgacaggcttcaccgtcgaggagagcctgggg
agttactacctcgacgctgtgctgcccgaagatcgggaatcggccctggccgaggtggcc
ctctcgctgcgcaaccccacccggcagtcccgccatgcggtgcgcttcatcaccagggat
gggttccgctgggtggaggtccatgcgcggcccctgctggatgcggatggcgtgctgacc
ggtgccagtggaacgctcaacgacatccacgactggcgggaggccgaggaacaggtccag
aagcagcagcgacagttggccagcatcctggacaccctgcccatcaacatctacctgaag
gacgccgaggggcgcttcctgttcgtcaatgaggagacctgtcgcaccctggggctgccc
gcggaagccatcaccggccgcacggacgaggatgtattcccgccggatctggccgcccag
ctgaggcaggaagaccttcgggtgtgggaatccggagagctgcgaaccagcgaagaagcc
caccacagtccctcgggaacccgctggttcctcgccggaaagacgctcatccaggcccac
acccgccatgaggccctgctgctggggttcagccttgacatcactcagcgcaagcaggcc
gagaaccaggcccacaccaaggagcgccagctcgaggacgccatcgaatcgctggattcg
ggttttgccatgttcgatgccgaggatcgactggtgaagtgcaaccagacctatcgggat
ctctatccggagattgcccctctgcttgtcccaggcacctcccacgagaccctcctgacc
cgctatgtgcaaagcggcgtgaacctcgggacggggctcactcctgaggcctggatccag
aaccggcgccgcgcgcaccagaaccccaccgcgcccatcgagcgccggatcggcaatcgc
tgggtccgcatcagtgatcgccgcaccagcgatggcggcatcgtcagccttcggaccgat
gtcacccgcctcaaggagcagcaggatgagctgcggaaggccaaggacgatgccgaggcc
gccacccgggccaaatccgatttcctggccaacatgagccatgaaatccgcacgcccatg
aacggtgtgctgggcatgaccggcttcctgctggacacgcccctgaatcccgaacagcgc
gaacatgccgagactgtgcacgcctgcgccagcggcctgctggagatcatcaacgacatc
ctggatttttccaaaatcgaagcgggcatgctcgatctggaaattctggatttcgatctg
cgggactgcaccgacgaagtgctcgccatgttcgcggtccaggccgaggccaagggcctg
gacctggcctgtttcctggatccggccattccctcacccctgcggggcgatcccgggcgc
atccgccagatcctcatcaacctcgtgggcaacgccatcaagttcacggcctccggctcg
gtcaccatccacgccttccttcagcagcgggaagcagaggccgtggacatccagttctct
ctcaaggacaccggcatcggcatcagcaaggaggctcaggcgcgcctcttccgatctttc
tcccaggccgatggctccatgacccgccgcttcggcggcaccgggcttggcctggccatc
tgccgccagctggtgacgatgatgggcggagagatccaggtggacagcggcccggggtca
ggctccaccttcaccttctcgctccgactggagacggccccggaggccattacggtcccg
aatcgtttgcaaggggccaccgtcctctgggtgggaccccccagcgccacccgcgagacc
acgcgggagcagctgcaggccatgggtctggtcctgaccgtggcctcttcagatgccatc
aaggcgcttgacccgcgtgccttccagatcgttctcctgcagggcgacctgcccgacggc
tgggagacggaccagctgcccttcatccacgtggtgccctggagccatccggcccgccac
gcctcccacagggcgaccctcgtcaggcccatccgacagcgtcccctcatggcagccctg
gccggggccctgggcttcacgcccgagcctctgactgcggatacgccgagcgccgacctt
ctggccatgccccgtcaggggcggctgctggtggccgaagacaaccccgtcaaccagaag
gtggcagtgcgctacctggaacggctcggcttccgggtggatgtggccgcgaacggcctg
gaagcccttgaggcctgcgcccgactgccctacgacctcatcttcatggattgccagatg
cccgaaatggacggctttgaagccacagtggccctgcgctcacaggaatcccaggctggc
gccccccggattcccatcgtggcgctgaccgcccatgccatggccggggagcgggcccgg
tgtctggccgcaggcatggatgactacctgaccaagccgcttaggttggacgaattggcc
cgagtaatccagcattggacccaggagcctcccatgtgcccagcccccagggatgaatcc
ctacccccccgcgacctgccccaggacatgctggatcacgccaccctccagaatctggtg
gagctcgatgatggcggtagtggtttgctgtcggaattgatcgagatcttccgggaggac
accccccggcgcatccacgacatcctcgccgccgcagccaaaggcgacgctctggaattc
tcccatgcgggccacgccctcaagggtggagccggggccctcggcgctgccgccatgcgc
cgctatgcggcggacatcgaagccctgggccgcagcggctccgtggaggcgggcccggat
ctccaggctgacctggagcgtttgttcctggattccctggccgccctggaagcctatgca
gccaaacttcgctag
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