Geothrix sp. PMB-07: Q9293_01855
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Entry
Q9293_01855 CDS
T09655
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00010
Glycolysis / Gluconeogenesis
gep00020
Citrate cycle (TCA cycle)
gep00620
Pyruvate metabolism
gep00650
Butanoate metabolism
gep00720
Other carbon fixation pathways
gep01100
Metabolic pathways
gep01110
Biosynthesis of secondary metabolites
gep01120
Microbial metabolism in diverse environments
gep01200
Carbon metabolism
gep01210
2-Oxocarboxylic acid metabolism
Module
gep_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Q9293_01855 (nifJ)
00020 Citrate cycle (TCA cycle)
Q9293_01855 (nifJ)
00620 Pyruvate metabolism
Q9293_01855 (nifJ)
00650 Butanoate metabolism
Q9293_01855 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
Q9293_01855 (nifJ)
Enzymes [BR:
gep01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
Q9293_01855 (nifJ)
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_6
TPP_enzyme_C
Fer4_7
Fer4_21
Fer4_10
Fer4_16
Fer4
Fer4_2
Fer4_8
Fer4_9
Fer4_17
Fer4_4
Fer4_15
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WLT32075
LinkDB
All DBs
Position
complement(419970..423524)
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AA seq
1184 aa
AA seq
DB search
MSQRVMKTLDGNEATASVAHRLSEVIAIYPITPSSNMGEWADEWSSQGKTNVWKTIPSVI
EMQSEGGAAGAVHGALQAGSLTTTFTASQGLLLMIPNMYKIAGELTPFCMHVSARTLATH
ALSIFGDHSDVMSCRMTGFAMLSSESVQHAHDFAAISHAATLRSRLPILHFFDGFRTSHE
VAKIEILNDEDLRHMVPDELVANFRKMALTPDQPVIRGTAQNPDTFFQAREACTPYYKAF
PAIVQQEMDRFAALTGRQYRLYDYYGHPEAERVVVIMGSGCDVTHEYVDWAMKQGQKVGV
LKVRLFRPFAIEEFVRALPATTKKIAVMDRCKEPGSPADPMHLDVLAALREGREEGHTTL
NPVVVGGRYGLSSKEFTPAMVQAVYENLAKDTPKNHFTIGIVDDVSHSSLPYDASFDVEP
SDVTRALFYGLGADGTVGANKNSIKIIAEETPNYGQGYFVYDSKKSGAITISHLRFGPRP
IKSAYLVTKSNFIACHQTSFLDKYEMLETAVPGATFLLNTPHDKDTVWDTLPREVQEAIV
EKKLKFYVIDAYEVGKNTGMGVRINTIMQTCFFAISGVLPREEAIEQIKKAIKKTYGKKG
DAIVQKNFVAVDETLAHLHEVKVPATVTATRKRPPMVADEAPDFVKRVSAVMMEGKGDLL
PVSAFPIDGTWPVGTTKWEKRNIALEIPEWDSSICIQCNKCAMVCPHAAIRAKVYEPSAL
AGAPGTFKAVDYKGPEYKGQKYTIQVAPEDCTGCTLCVEVCPAKDKSNPKHKAIDMVAQA
PLRDAEVANFKFFLDLPEVDRTTVKLDVKGTQFLEPLFEYSGACSGCGETPYIKLLTQLF
GDRTLIANATGCSSIYGGNLPTTPYTTNKDGRGPAWANSLFEDNAEFGLGLRLSVDKHQE
FGLELMHRLGAKLGDELVAGIATADQTTEAGIKAQRERVDILKQKLAGINQPEAKMLHDL
ADYLVNKSVWIIGGDGWAYDIGYGGLDHVLASGRNVNVLVLDTEVYSNTGGQASKSTPMG
AGAKFAMAGKHMPKKDLGMIAMSYGGIYVAKVAFGFRDAQTVKAFQEAESYNGPSLILAY
SHCIAHGYDLAHGCDQQKLAVDSGHWPLFRFDPRRLEKGEVPLQMDSGAPKVPMLQYVRN
ETRYRMIEQQNPEHFKKLMDQAQLDTTNRYSVYEQLAKLSVTAK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagagtgatgaagacccttgatgggaacgaggccaccgcctcggtggcccat
cgcctcagcgaggtcatcgccatctatccgatcacgccttcttccaacatgggcgagtgg
gcggatgagtggagctcccagggcaagaccaacgtctggaagaccatcccctcggtgatc
gagatgcagtccgagggcggcgccgcgggcgccgtccacggcgccctccaggccggcagc
ctcacgacgaccttcacggcgtcccagggcctgctgctcatgattcccaacatgtacaag
atcgccggcgaactgacgcccttctgcatgcacgtcagcgcccgcactctggccacgcac
gccctcagcatcttcggcgaccactccgacgtgatgtcctgtcgcatgaccggcttcgcc
atgctgagctccgaaagcgtgcagcacgcccacgacttcgcggccatcagccacgccgcg
acgttgcgcagccgtctgcccatcctgcatttcttcgatggcttccgcaccagccacgaa
gtcgccaagatcgagatcctcaacgacgaggacctgcggcacatggtgcccgacgagctg
gtggccaacttccgcaagatggccctgacgcccgatcagccggtcatccgcggcaccgcc
cagaaccccgacaccttcttccaggcccgtgaggcctgcaccccctactacaaggccttc
ccggccatcgtgcagcaggagatggaccgcttcgccgccctcaccggtcgccagtaccgc
ctctacgactactacggccaccccgaggccgagcgcgtggtcgtcatcatgggctccggt
tgcgacgtcacccacgaatacgtggattgggccatgaagcagggccagaaggtgggcgtc
ctcaaggtccgcctgttcaggcctttcgccatcgaagagttcgtccgcgccctgcccgcc
accaccaagaagatcgccgtcatggatcgctgcaaggagcccggctcgcctgcagatccc
atgcacctggatgtgctcgccgcgctgcgtgagggccgcgaagagggccacaccaccctc
aaccccgtggtggtgggtggccgctacggtctctcctccaaggaattcacccccgccatg
gtccaggctgtctacgagaacctggccaaggacacgccgaagaaccacttcaccatcggc
atcgtggacgacgtgagccacagctccctgccctacgacgccagcttcgacgtggagccc
tccgatgtgacccgcgcgctgttctacggcctgggcgcggacggcaccgtgggcgccaac
aagaactccatcaagatcatcgccgaggagacccccaactacggtcagggctacttcgtc
tatgactccaagaagtccggcgccatcaccatcagccacctgcgcttcgggccccgcccc
atcaagagcgcctacctggtgaccaagtccaacttcatcgcctgccaccagaccagcttc
ctcgacaaatacgagatgctggaaaccgccgttcccggcgccactttcctgctgaacacg
ccccacgacaaggacactgtgtgggatacgctgccgcgcgaagtgcaggaagccatcgtc
gagaagaagctcaagttctacgtgatcgacgcctacgaggtgggcaagaacacgggcatg
ggcgtgcgcatcaacaccatcatgcagacctgcttcttcgccatttctggcgtgctgccc
cgcgaggaggccatcgagcagatcaagaaggccatcaagaagacctacggcaagaagggc
gacgccatcgtccagaagaacttcgtggccgtggatgaaaccctggcccacctccatgaa
gtgaaggtgcccgccacggtcaccgccacccgcaagcgtccgcccatggtggccgacgag
gcaccggacttcgtcaagcgtgtcagcgccgtgatgatggaaggcaagggcgacctgctg
cccgtgagcgccttccccatcgacggcacctggcccgtgggcaccaccaagtgggagaag
cgcaacatcgcgctggagatccccgagtgggacagctccatctgcatccagtgcaacaag
tgcgcgatggtttgcccccacgccgccatccgcgccaaggtctacgagcccagcgccctg
gctggcgcccctggcaccttcaaggccgtggactacaagggccccgaatacaagggccag
aagtacaccatccaggtggctcccgaggattgcacgggctgcaccctttgcgtggaagtc
tgccccgccaaggacaagagcaaccccaagcacaaggccatcgacatggtcgcccaggcg
cccctgcgcgatgcggaagtggccaacttcaagttcttcctcgatctgcctgaggtcgac
cgcaccacggtgaagctggacgtgaagggcacgcagttcctcgagcccctcttcgaatac
agcggcgcctgctcgggctgcggcgagacgccctacatcaagctgctcacccagctcttc
ggcgaccgcaccctcatcgccaacgccacaggctgctccagcatctacggcggcaacctg
ccgacgacgccctacaccaccaacaaggatggccgcggtcccgcctgggccaacagcctc
ttcgaggacaacgcggaattcggcctgggcctgcggctctcggtcgacaagcaccaggag
ttcggcctcgagctgatgcaccgcctgggcgccaagctcggtgatgaactggtcgccggc
atcgccaccgccgaccagaccaccgaggccggcatcaaggcccagcgcgagcgggtcgac
atcctcaagcagaagctggcgggcatcaaccagcccgaagccaagatgctccacgacctg
gccgactacctggtgaacaagagcgtctggatcatcggcggcgacggctgggcctatgac
atcggctacggcggcctggatcacgtgctggcctctggccgcaacgtgaacgtcctggtc
ctcgacaccgaggtctactccaacaccggcggccaggcctccaagtccacgcccatgggc
gcgggcgccaagttcgccatggccggcaagcacatgcccaagaaggatctgggcatgatc
gccatgtcctacggcggcatctacgtcgccaaggtggccttcggcttccgcgacgcgcag
acggtgaaggccttccaggaagccgagtcctacaacgggcccagcctcatcctggcctac
agccactgcattgcccacggctacgatctcgcccacggctgcgaccagcagaagctggcc
gtcgactccggccactggccgctgttccgctttgacccccgccgcctggagaagggcgaa
gtgcccctgcagatggattccggcgcgcccaaggtgcccatgctccagtacgtccgcaac
gagacccgctaccgcatgatcgagcagcagaaccccgagcacttcaagaagctcatggat
caggcccagctcgacaccaccaaccgttactccgtctacgaacagctcgccaagctgtcc
gtgacggccaagtga
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