Geothrix sp. PMB-07: Q9293_02250
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Entry
Q9293_02250 CDS
T09655
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Q9293_02250 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gep01007
]
Q9293_02250 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gep03016
]
Q9293_02250 (lysS)
Enzymes [BR:
gep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Q9293_02250 (lysS)
Amino acid related enzymes [BR:
gep01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Q9293_02250 (lysS)
Transfer RNA biogenesis [BR:
gep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Q9293_02250 (lysS)
Prokaryotic type
Other AARSs
Q9293_02250 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WLT32153
LinkDB
All DBs
Position
505235..506749
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AA seq
504 aa
AA seq
DB search
MQPNQYRDVRLEKLQKLKDLGVEPWPRKAKRSHGIAELAATYADAETWTNEKLEGLGLTV
SVMGRILTIREMGKSVFAHLTENGEKVQGFFRMNDLSEAHWELIKLLDMGDFISITGPLM
RTKTGELSVRVKEIQFLSKALLPLPEKWHGLQDKEQRYRQRYLDLVSNGDVLKTFQTRSR
IVSAVRRFMEGQGYLEVETPMMQPIPGGATARPFITHHNALDMDLYLRIAPELYLKRLIV
GGFEKVFEINRSFRNEGISVRHNPEFTMMEMYEAGSDLRDMMALTEKLFETVTRDVMGSQ
QLPWGEAMISYAAPFRRLTMKDAIAEYGGIERRLLEDGDCVRSLAKAVHIEDVDKKTVGT
LLGDLFEHHAEKQLIQPTFITDYPIELSPLTKTLEGDDRFVDRFELFIGGMELANAYSEL
NDPVDQMGRFQAQMDEREAGNDEAMLLDQDFVTSLEHGLPPTGGEGIGIDRLVMLLTNSA
SIRDVILFPLMRPMKPSETPDAED
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaaccagtaccgcgacgtgcgcctcgagaagctccagaagctgaaggacctg
ggcgtggaaccctggccccggaaggcgaagcggtcccatggcatcgcggaattggcggcg
acctatgcggatgcggagacttggaccaacgagaagctggagggccttgggctcacggta
tcggtcatgggtcgcattctcaccatccgcgagatgggcaagagcgtgttcgcccacctc
accgagaacggcgagaaggtgcagggcttcttccgcatgaacgacctttcggaagctcac
tgggagctcatcaagctcctggacatgggcgatttcatcagcatcacgggccccctcatg
cgcaccaagacgggtgagctgagcgtgcgcgtgaaggagatccagttcctgagcaaggcg
ctgctgccgctccccgagaagtggcatggcctgcaggacaaggagcagcggtatcgccag
cggtacctggatctcgtctccaacggcgacgtgctgaagaccttccagacccgttcgcgc
atcgtaagcgccgtgcggcgcttcatggaaggacagggctacctggaggtggaaacgccc
atgatgcagcccatcccaggtggcgccacggcccggcccttcatcacgcaccacaatgcc
ctggacatggacctctaccttcggatcgcgccggaactgtatctgaagcgtctcatcgtg
ggcggcttcgagaaggtgttcgagatcaatcgcagcttccgcaacgaaggcatcagcgtc
cggcataatcccgaattcaccatgatggaaatgtacgaggcgggcagcgacctgcgcgac
atgatggccctcacggagaagctgttcgagaccgtcacccgtgatgtcatgggttcccag
cagctgccctggggcgaggcgatgatctcctacgccgcacccttccggcgcctcaccatg
aaagatgccatcgcggagtacggcggcatcgagcggcgtctcctggaggatggggattgc
gtgcgcagcctggccaaggccgtgcacatcgaggacgtggacaagaagaccgtgggcacc
ctgctgggcgacctcttcgagcaccacgccgagaagcagctcatccagcccaccttcatc
accgactaccccatcgagctgtcgcccctgaccaagacactggaaggcgacgaccgcttc
gtggaccgcttcgagctgttcatcggcggcatggaactggccaacgcctactcagagttg
aacgatcccgtcgaccagatgggccgcttccaggcccagatggatgaacgggaggcaggc
aacgacgaagccatgctgctggatcaggactttgtcaccagcctggagcatggcctgccc
cccaccggtggtgaaggcatcggcatcgatcgcctggtcatgctgctcaccaacagcgcc
agcatccgcgacgtcatcctgttcccgctcatgcggcccatgaaacccagcgaaacgcct
gacgcggaagattga
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