Geothrix sp. PMB-07: Q9293_03045
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Entry
Q9293_03045 CDS
T09655
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
gep
Geothrix sp. PMB-07
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gep03009
]
Q9293_03045 (rlmF)
Enzymes [BR:
gep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
Q9293_03045 (rlmF)
Ribosome biogenesis [BR:
gep03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q9293_03045 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_25
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
WLT32310
LinkDB
All DBs
Position
complement(685230..686207)
Genome browser
AA seq
325 aa
AA seq
DB search
MGIPRQSASPRPAKPGLHPRNRHAAGYDFQRLVAASPELGPFLRKAPHGGLSIDFANPAA
VKALNRALLAEAYGIRGWDIPSGYLCPPIPGRSDYLHHLADLLAEDANGVPPRGPGLRVL
DVGVGANAIYPLVGHREYGWSFVGSDIDAAALASASRILAANPEWSGAIELRHQADPTAI
FRGVVRPGERFDLTLCNPPFHGSAREAREAAEQKWRKLGKNAGGSARNFGGQGPELWCEG
GEAGFIRRMIAEGLDLGDRVGWFTSLVSSSKSLPAIHRALRHAEAREIRTVAMAQGQKQS
RFVAWSFLDVAARRAFHPTSTPELA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgggtattcctcgccagtccgccagtccccggcccgccaagccgggcctgcatccgcgc
aaccggcacgcggcgggctacgatttccagcggctggtcgcggccagcccagaactgggg
cccttcctccgcaaggcgccccatggcggcctctccatcgatttcgccaatcccgcggcg
gtgaaagccctgaaccgggccctgctggccgaggcctacggcatccgcggctgggacatc
cccagtggctacctctgcccgccgattcccggtcggtcggactacctgcaccacctggca
gatctcttggcggaagatgccaacggcgtgccccctcgcggcccaggcttgcgcgtgctg
gatgtgggcgtgggcgccaacgccatctacccgctcgtgggccaccgcgaatacggctgg
tccttcgtgggctctgacatcgatgcggcggctctggcttcggcctcccgcattctggct
gccaaccccgaatggagcggcgccattgaactgcgccatcaggctgatccaaccgccatc
tttcgcggcgtggtgcggcccggagagcggttcgacctgaccctctgcaatccgcccttc
cacggctcggcccgggaagctcgcgaggcggccgagcagaagtggcgcaaattgggcaag
aatgccggtgggtcggcgcgcaactttggcggccagggccccgaactctggtgcgagggc
ggcgaggcaggcttcatccgccgcatgatcgccgaaggcctcgacctgggtgatcgcgtg
ggctggttcacatccctggtgtcgagctccaagtcccttcccgccatccatcgcgccctc
cgtcatgcggaagcccgcgagatccgcaccgtggccatggcccagggccagaagcagagc
cgcttcgtggcctggagcttcctggatgtggcggcgcggcgggccttccatccgacatca
acaccggagctggcttga
DBGET
integrated database retrieval system
