Geothrix sp. PMB-07: Q9293_03540
Help
Entry
Q9293_03540 CDS
T09655
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00450
Selenocompound metabolism
gep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Q9293_03540
Enzymes [BR:
gep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Q9293_03540
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Q9293_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
WLT32407
LinkDB
All DBs
Position
complement(804123..805358)
Genome browser
AA seq
411 aa
AA seq
DB search
MTTTLQPLDVTAIRKDFPLLSRDFHGKPVVYLDSAVSGQMPLVAIERMAKYERDEHTNVH
RGVSTLSQEATDFYEAAREKVRKFIGAGSIKEIVWTRGTTEAINLVAQTYGRVHVKEGDE
ILLSAMEHHANIVPWQMLAQEKGATIKVIPMTDAGELILDSLDELITERTKLVGVVHVSN
VLGTVNPVKEIIARAHAKGVPVLVDGAQAVPHLHVDVRDLDVDFYVFSGHKLSGPTGIGV
LYGKLAHLEAMPPWHGGGNMIRSVSWEKTTYMPAPGKFEAGTPPIAAAIGLGAAIDYLNG
LGLERIAAHEHELLVYATEQLSAVPGLRILGNAKDKASVISFVVEGIHPHDMGSLLDGEG
VVVRAGHHCAQPVMARFNVPATTRASFAYFNTREEVDVLVASVLKAIELFK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacccttcagcccctcgacgtcaccgccatccgcaaggacttccccctgctc
tcccgcgatttccacggcaagcccgtggtctacctcgacagcgccgtcagcggccagatg
cccctggtggccatcgagcgcatggcgaagtacgagcgcgacgagcacaccaacgtccac
cgcggcgtgagcaccctcagccaggaggccacagacttctacgaggccgcccgcgagaag
gtgcgcaagttcatcggcgccggctccatcaaggagatcgtctggacccgcggcaccacg
gaagccatcaacctcgtggcccagacctatggccgggttcatgtgaaggagggcgacgaa
atcctgctctcggccatggagcaccacgccaacatcgtgccctggcagatgctggcccag
gagaagggcgccaccatcaaggtcatccccatgaccgatgccggcgagctgatcctggat
tccctggatgagctgatcaccgagcgcaccaagctggtcggcgtggtgcacgtcagcaac
gtgctcggcaccgtgaacccggtgaaggagatcatcgccagggcccacgccaagggcgtg
cccgtgctggtggatggcgcccaggcggtgccgcacctgcacgtggacgtgagggaccta
gacgtggatttctacgtcttcagcgggcacaaactatcgggccccacgggcatcggcgtg
ctctacggcaagctggcccatctggaggccatgcccccctggcacggcggcggcaacatg
atccgctccgtgagctgggagaagaccacctacatgccggcgcccggcaagttcgaggcg
ggcacgccgcccatcgccgccgccatcggcttgggggctgccatcgactacctgaatggc
ctgggcctggagcgcatcgccgcccacgagcacgagctgctggtctatgccaccgagcag
ctgtcggccgtcccgggcctgcgcatcctcggcaacgcgaaggacaaggccagtgtcatc
tccttcgtggtggagggcatccacccccacgacatgggcagcctgctggatggcgagggc
gtcgtcgtccgcgccggccaccactgcgcccagcccgtcatggcccgcttcaacgtcccc
gccaccacccgcgcctccttcgcctacttcaacacccgcgaggaggtggatgtgctggtc
gcctccgtcctgaaagcgatcgagttgttcaaatga
DBGET
integrated database retrieval system
