Geothrix sp. PMB-07: Q9293_04780
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Entry
Q9293_04780 CDS
T09655
Name
(GenBank) deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00240
Pyrimidine metabolism
gep01100
Metabolic pathways
gep01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Q9293_04780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gep02044
]
Q9293_04780
Enzymes [BR:
gep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Q9293_04780
Secretion system [BR:
gep02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Q9293_04780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WLT32647
LinkDB
All DBs
Position
1099193..1099624
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AA seq
143 aa
AA seq
DB search
MSRAQLKDEVFMNMALELSRLGTCCRLKVGAVLLRADGGVAAAGFNGALPGMAHCTPETC
KPGQRCLHTSHAEENALGFCDGPVATAYVTHEPCLTCCRALVRRGVRRVVFQHPYTSIAD
QERAERQGILDHFAVKWEQLGGN
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgcgcagctgaaggatgaagtcttcatgaacatggcgctcgaactgagccgc
ctgggcacctgttgtcgcctgaaggtgggcgcggtgctgctccgtgctgatgggggcgtc
gccgcagcgggcttcaacggcgcgctgcccggcatggcccactgcacgccggagacctgc
aagccggggcaacgctgcctccacaccagccatgctgaggagaacgcgctgggcttctgc
gacggccccgtggccacggcctacgtcacccacgagccctgcctcacctgctgccgcgcc
ctggtgcggcggggggtgcggcgggtggtgttccagcatccctacacgagcatcgccgac
caggagcgggcagagcgccagggcatcctcgatcatttcgccgtgaagtgggaacagctc
ggcggaaattga
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