Geothrix sp. PMB-07: Q9293_06000
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Entry
Q9293_06000 CDS
T09655
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q9293_06000 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gep03019
]
Q9293_06000 (groL)
03110 Chaperones and folding catalysts [BR:
gep03110
]
Q9293_06000 (groL)
03029 Mitochondrial biogenesis [BR:
gep03029
]
Q9293_06000 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gep04147
]
Q9293_06000 (groL)
Enzymes [BR:
gep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Q9293_06000 (groL)
Messenger RNA biogenesis [BR:
gep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Q9293_06000 (groL)
Chaperones and folding catalysts [BR:
gep03110
]
Heat shock proteins
HSP60 / Chaperonin
Q9293_06000 (groL)
Mitochondrial biogenesis [BR:
gep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Q9293_06000 (groL)
Exosome [BR:
gep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Q9293_06000 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Q9293_06000 (groL)
Exosomal proteins of breast cancer cells
Q9293_06000 (groL)
Exosomal proteins of colorectal cancer cells
Q9293_06000 (groL)
Exosomal proteins of bladder cancer cells
Q9293_06000 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WLT32883
LinkDB
All DBs
Position
1365538..1367163
Genome browser
AA seq
541 aa
AA seq
DB search
MAKSIIYAEDARQAILRGVNKLADAVQVTLGPKGRNVLIEKKFGSPLMTKDGVTVAKEVE
LKDKHENMGAQLVREVASKTSDIAGDGTTTATVLARAIYREGIKAVVSGANTMEIKKGID
LAVDTVVAAIDEIKKPVEGNAIAQVGTISANGDAEIGKIIAEAMAKVGKDGVITVEEAKG
RETELNVVEGMQFDRGYLSPYFVTNPDQMKVELENPYILAYEKKVSNMRDLLPLLEQVVN
SRRPLLIIAEDVDGEALATLVVNKIRGTLNVAAVKAPGFGDRRKAMLEDIAILTGGKAIS
EDLGLKLENLTLADLGTAKKIVIDKENTTIVEGAGASEAIQGRVKQIRAQVEVSTSDYDK
EKLQERLAKLVGGVAVIKVGAASETEMKEKKARVEDAMHATKAAVEDGIVAGGGVALLRS
LTKLAALKATGDQATGIEIVRKSLEEPLRQIANNAGVEGSVVVNAVREGKDNYGYNAATN
EYGDMVKFGVVDPAKVTKSALRNAASVASMMLTTEAIITEIPEPKAPAPAGPGMGGMEDM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccatcatctatgccgaagacgcccgccaggccattctgcgcggcgtgaac
aagctcgccgacgcggtgcaggtcaccctcgggcccaagggccgcaacgtcctcatcgag
aagaagttcggttcccccctcatgaccaaggacggcgtcaccgtcgccaaggaagtggag
ctgaaggacaagcacgagaacatgggcgcccagctggtgcgtgaggtcgcctccaagacc
tccgacatcgccggcgacggcaccaccaccgccaccgtgctggcccgcgccatctaccgt
gagggcatcaaggccgtcgtgagcggcgccaacaccatggagatcaagaagggcatcgac
ctcgccgtcgacaccgtcgtggccgccatcgacgagatcaagaagcccgtcgagggcaac
gccatcgcccaggtcggcaccatctccgccaacggcgacgccgagatcggcaagatcatc
gccgaagccatggccaaggtcggcaaggacggcgtcatcaccgtcgaggaagccaagggc
cgtgagaccgagctgaacgtggtcgagggcatgcagttcgaccgcggctacctcagcccc
tacttcgtgaccaaccccgaccagatgaaggtcgagctggagaacccctacattctcgcc
tacgagaagaaggtctccaacatgcgcgacctcctgcccctgctggagcaggtcgtcaac
agccgccgccccctgctgatcatcgccgaggacgtggacggcgaagcgctggccaccctc
gtggtgaacaagatccgcggtaccctgaacgtggccgccgtgaaggctcccggcttcggc
gaccgccgcaaggccatgctggaagacatcgccatcctgacgggtggcaaggccatcagc
gaggatctgggcctcaagctcgagaacctcacgctggctgacctcggcaccgccaagaag
atcgtcatcgacaaggagaacaccaccatcgtcgagggcgccggcgccagcgaggccatc
cagggccgcgtgaagcagatccgcgcccaggtcgaggtctccaccagcgactacgacaag
gagaagctgcaggaacgtctggccaagctcgtgggcggcgtcgccgtcatcaaggtgggc
gcggcttccgagaccgagatgaaggagaagaaggcccgcgtggaagacgccatgcatgcc
accaaggccgccgtcgaggacggcatcgtggcgggcggcggcgtcgcgctgctccgcagc
ctgaccaagctggccgccctgaaggccaccggcgaccaggccacgggcatcgagatcgtc
cgcaagtccctggaggagcccctccgccagatcgcgaacaatgccggtgtcgaaggctcc
gtggtcgtcaacgccgtccgtgagggcaaggacaactacggctacaacgccgccaccaac
gagtacggcgacatggtcaagttcggcgtcgtcgaccccgccaaggtgaccaagtccgcc
ctgcgcaacgccgcctccgtggcctccatgatgctgaccaccgaagccatcatcaccgag
atccccgagcccaaggctcccgctcctgcgggccccggcatgggcggcatggaagacatg
tattaa
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