Geothrix sp. PMB-07: Q9293_06970
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Entry
Q9293_06970 CDS
T09655
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00470
D-Amino acid metabolism
gep00550
Peptidoglycan biosynthesis
gep01100
Metabolic pathways
gep01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q9293_06970
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q9293_06970
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Q9293_06970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gep01011
]
Q9293_06970
Enzymes [BR:
gep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Q9293_06970
Peptidoglycan biosynthesis and degradation proteins [BR:
gep01011
]
Precursor biosynthesis
Amino acid ligase
Q9293_06970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WLT33063
LinkDB
All DBs
Position
1576604..1577731
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AA seq
375 aa
AA seq
DB search
MSEQPSKQLGKQPGGPLSVGLLFGGESPEHEVSIVTARAIAEHLDPARFLVRPMGIARNG
VWAVNGDPFARLAAGELPERSDHPFLPLERGAEALALPDLFFNALHGAGGEDGQIQGYLE
LLHRPYTGAGLLAMAAGMDKWITKRLWESEGLPVVPYVGLTEERWNREQAACLVDCGKLG
LPLFVKPANLGSSIGVEKVKRAEDLPGALDRAFTFDRRVLVEQGLDIREIEVAVLGGDEP
LVSQPGEVIVADEFYTFEDKYLHGKSRTEIPAQIPEELTDLVRKLAAKAFAASDGYGMAR
VDFFLERLTGRIFLNELNFIPGFTSISMYPKMMAASGVPYATLLTRLIDLALARHAQTAA
KQKGFQSGSTWFQKG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagccaagcaagcaactgggcaagcaaccgggcgggccactgagcgttggt
ctgctcttcggcggggaatcccccgagcacgaagtctccattgtcacggcgcgggccatc
gcggagcatctggatcccgcacggttcttggtgcggcccatgggcattgcgcggaatggc
gtttgggcggtcaatggcgaccccttcgcccggctggctgcgggcgaactgccagagcgc
agcgaccatcccttccttccgctggaaaggggcgctgaagcgctggccttgccggatctc
ttcttcaatgccctccatggcgccggcggtgaggatggccagatccagggttacctggaa
ctgcttcaccgcccctacaccggtgccggtctgctggccatggccgcgggcatggacaag
tggatcaccaagcggctgtgggaatccgaggggttgccggtggtgccctacgtggggctc
accgaggaacgttggaaccgggaacaagccgcatgcctggtggattgcgggaagctgggc
ctgcccctgttcgtgaagcccgccaacctgggcagcagcatcggcgtggagaaggtcaag
cgtgccgaggatcttcctggcgccctggaccgggctttcaccttcgaccgccgtgtgctg
gtggagcaggggctcgacatccgtgaaatcgaggtggcggtcctcggcggggatgaaccg
ctggtgtcccagcccggcgaagtcatcgtggccgacgagttctacacgttcgaggacaaa
tacctccacggcaaaagccgtacggagatccccgcccagatccccgaagaactgacggac
ctggttcgcaagctggcggcgaaggccttcgccgcctcggatggctacggcatggcgcgg
gtggatttctttttggagcggctcaccgggcggatctttctcaacgagctcaacttcatt
cccggcttcaccagcatttccatgtatcccaagatgatggccgccagcggcgtgccctac
gccaccctgctcacccgtctcatcgatctggccctggccaggcatgcccagactgcggcc
aaacagaaggggttccaatccggcagtacgtggttccagaagggttaa
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