Geothrix sp. PMB-07: Q9293_07935
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Entry
Q9293_07935 CDS
T09655
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00061
Fatty acid biosynthesis
gep00071
Fatty acid degradation
gep01100
Metabolic pathways
gep01212
Fatty acid metabolism
gep02024
Quorum sensing
gep04146
Peroxisome
Module
gep_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Q9293_07935
00071 Fatty acid degradation
Q9293_07935
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Q9293_07935
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q9293_07935
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gep01004
]
Q9293_07935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gep04147
]
Q9293_07935
Enzymes [BR:
gep01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Q9293_07935
Lipid biosynthesis proteins [BR:
gep01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Q9293_07935
Exosome [BR:
gep04147
]
Exosomal proteins
Exosomal proteins of breast milk
Q9293_07935
Exosomal proteins of breast cancer cells
Q9293_07935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WLT33253
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All DBs
Position
complement(1785646..1787469)
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AA seq
607 aa
AA seq
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MAQPIETIAQLFYQAVERNLPDALASKRNGAFVPMSHVEMTALVERLALAMAARGLKVGD
RVAIMSENRPEWAITDFACAIQGLPDVTIYCTLNAPQAAFILKDSQARWVICSDRTQLDK
VLTHWSELPHLEVAVLMDGELPEGTGRTLISWAVLQNEGLAMEDRRPEVRAWGAQRKASD
ILTLIYTSGTTADPKGAMLTHGNLVTNVLAAEATVDFIDDERALSFLPLTHIFERMAGQF
LWFHIGAAIYYAESVNTVAADLLEVRPTVMASVPRIYEKIYAKIYDTVSSGPFIKRLIFH
WAMQAGRQALPYLLKNQEPPSWKGAWYRAARTVVFEKIRQRTGGRLKVAVSGGAPLGGKI
MEFFWILGIPILEGYGLTETSPIITVNRFGEVQPGSVGRPLYKEWNGRPFVKIAVDGEIL
CQGPNIMQGYWNNETATREAIDDDGYFHTGDIGHFDDSGRLYITDRKKELIVTSGGKKVA
PQPIENKLKEDKYISQAVLIGDQRNFITALIVPNFDSLVRWAGYKKIPVKSLSALVKDPQ
VYAKLGSRVERVNEQLSNYERIKKIVILDQEMTLEGGQLTPSLKVKRRVVNQMYSAQIEA
MYKEAKD
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagcccatcgaaaccattgcccagcttttctatcaggcggtggaacgcaacctt
ccggacgcgctcgcctccaaacggaatggcgccttcgtgcccatgtcgcacgtggagatg
acggccctggtggagcggctggcgctggccatggccgcccgtggactcaaggtgggcgat
cgcgtggcgatcatgtccgagaaccgccccgaatgggccatcacggatttcgcctgcgcc
atccagggccttcccgacgtcaccatctactgcaccctgaatgccccccaggcggccttc
atcctcaaagacagccaggcccgctgggtgatctgctccgaccgcacccagctcgacaag
gtgctcacccactggagcgagctgccccatctcgaagtggccgtgctcatggatggcgaa
ctccctgagggcacaggccgcaccctcatctcctgggccgtcctccagaatgagggcctg
gccatggaggaccgtcggcccgaggtgcgggcctggggcgcccagcgcaaggcctcggac
atcctcaccctgatctatacctcgggcaccaccgccgatcccaagggcgccatgctcacc
catggcaacctcgtcaccaacgtgctggccgccgaagccaccgtagatttcatcgacgac
gagcgggccctcagcttcctgcctctcactcatatcttcgagcgcatggccgggcagttc
ctctggttccacatcggcgcggccatctactatgccgaaagcgtgaacaccgtcgcggca
gacctcctggaagtgcggcccaccgtcatggcctcggtgccgcgcatctacgaaaagatc
tacgccaagatctacgacacagtctcttcggggcccttcatcaagcgcctcatcttccat
tgggccatgcaggccgggcgccaggccctgccctacctgctgaagaaccaggagccaccc
tcctggaagggcgcctggtaccgcgccgcccgcaccgtggtgttcgagaaaatccgccag
cgcaccggtggccgcctgaaggtggccgtcagcggcggtgcgcccctgggcgggaagatc
atggagttcttctggatcctgggcatccccattctggagggctacggccttaccgaaacc
agccccatcatcacggtgaaccgcttcggtgaagtgcagcccggcagcgtgggacggccc
ctctacaaggaatggaatgggcgccccttcgtgaagatcgcagtggatggcgagatcctc
tgccaggggcccaacatcatgcagggctactggaacaatgaaactgccacccgggaggcc
atcgatgacgacggctacttccacaccggcgacatcggccacttcgatgattccggtcgg
ctgtacatcacggaccgcaagaaggaactcatcgtcaccagcggcggcaagaaggtggcc
ccccagcccatcgaaaacaagctgaaagaggataagtacatttcccaggccgtgctcatc
ggggaccagcgcaatttcatcacggcgctcatcgtgccgaatttcgacagcctcgtgcgc
tgggccggctacaagaagatccccgtgaagtctctgtcagccctggtgaaggacccccag
gtctacgccaaactgggcagccgggtggagcgcgtcaacgagcagctctcaaactatgag
cgcatcaaaaaaatcgtcatcctggatcaggagatgacccttgagggaggacagctcacg
ccctcgctcaaggtgaaacggcgcgtggtgaaccagatgtactccgcccagattgaggcg
atgtacaaggaagcgaaggactga
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