Geothrix sp. PMB-07: Q9293_13300
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Entry
Q9293_13300 CDS
T09655
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Q9293_13300 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gep01007
]
Q9293_13300 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gep03016
]
Q9293_13300 (aspS)
03029 Mitochondrial biogenesis [BR:
gep03029
]
Q9293_13300 (aspS)
Enzymes [BR:
gep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
Q9293_13300 (aspS)
Amino acid related enzymes [BR:
gep01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Q9293_13300 (aspS)
Transfer RNA biogenesis [BR:
gep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Q9293_13300 (aspS)
Prokaryotic type
Other AARSs
Q9293_13300 (aspS)
Mitochondrial biogenesis [BR:
gep03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Q9293_13300 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WLT30691
LinkDB
All DBs
Position
3024345..3026315
Genome browser
AA seq
656 aa
AA seq
DB search
MKLDRLGDFSRSHRNGDLRLDHAGQTVRLLGWCRRVRNLGSLVFLDLRDRWGLVQLVANE
ETADPELLAKLKAVRSEFVLAAEGVVAERESKNPNMATGDIEIRLTGLKILNTAAPLPFP
LEDEHVGEDLRLTYRFLDLRREQLQRNMILRSEASNIIRNYFRKNDFVEFETPILGKSTP
EGARDYLVPSRVHAGQFFALPQSPQLYKQMLQVSGFERYVQICRCFRDEDLRADRQPEFT
QVDVEMSFVRQEDIQALIEGLMVELCPLVGQKAVAPFQRLPYKDAMEWYGSDKPDLRCKL
KIQDVTNLFAQSEFNLFRAASDSQGQRRVRGLFFPGEAAGAYSRKQLDELQETAKQLGAG
GLPYVKWGKDGLASSFKKFLTPELEAALKATLSIGGEGLAIFAVGTDDQTSRVLGDLRLR
LAKALGLLDESAFEFLWVVDFPLFQWDEDDQRFVACHHPFTSPHPEDLDLLQSNPGACRA
VAYDLVLNGYELGGGSIRIHDAETQSLMFRTIGISDAEARAKFGYLLDALSFGAPPHGGL
ALGLDRLVMLLAGEDNIREVIAFPKTAQARCLMTDAPSPVDERQLRDLHLLTDAKQTYRV
GAVFFESAEGGNAELRGQALQQITQLTPRQAQGLVTLDAQGQILDAQTLSGPTFEF
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgatcggcttggcgacttctcacgctcccaccgcaacggcgacttgcgtctc
gatcacgcgggccagacggtgcgcctgctcggctggtgccgccgggtgcgcaacctgggc
tcgctggtgttcctggatctccgcgaccgctggggcctggtgcagctggtggccaacgag
gagaccgccgatcccgagctgctggccaagctcaaggccgtgcgcagcgagttcgtgctg
gcggcagaaggcgtggtggccgaacgcgagagcaagaaccccaacatggccacgggtgac
atcgagatccgcctcacgggcctgaagatcctcaacaccgccgcgccgctgccctttccc
ctggaagacgagcacgtgggcgaggatctgcgcctcacctaccgtttcctggatctgcgc
cgcgagcagctgcagcgcaacatgatcctgcgcagcgaggcctccaacatcatccggaac
tacttccggaagaacgatttcgtcgagttcgagacgcccatcctcggcaagtccaccccc
gagggagctcgcgattacctggtgcccagccgggtccacgccgggcagttcttcgccctg
ccccagagcccccagctctacaagcagatgctgcaggtctcgggcttcgagcgctacgtg
cagatctgccgctgcttccgggacgaggatctgcgcgccgaccgccagcccgagttcacc
caggtggacgtggaaatgagcttcgtccgccaggaggacatccaggccctcatcgaaggc
ctgatggtggagctctgtcccctggtgggccagaaggccgtcgcccccttccagcgtctg
ccctacaaagacgccatggagtggtacggctccgacaagcccgacctccgctgcaagctc
aagatccaggacgtgacgaacctctttgcccaaagcgagttcaacctgttccgtgccgcc
tccgactcccaggggcagcgccgtgtgcgtggcctcttcttccctggcgaggctgccggt
gcgtacagccgcaagcagctggacgaactgcaggagacggccaagcagctgggcgcggga
ggcctgccctacgtcaaatggggcaaggatggcctggcctccagcttcaagaagttcctc
acgcccgaactcgaagctgcgctgaaggccaccctaagcatcggcggcgaaggcctcgcc
atcttcgccgtgggcaccgatgaccagacctcccgggtgctgggcgacctgcgtctgagg
ctggccaaggccttgggtctcctggatgaatccgccttcgagttcctgtgggtggtggat
ttccccctctttcaatgggatgaggatgatcagcgcttcgtggcctgccaccaccccttc
accagcccccatcccgaagacctcgacctgctccagtccaatcccggcgcctgccgcgcc
gtggcctacgacctggtgctcaacggctatgagctgggcggcggcagcatccgcattcac
gatgccgaaacccaaagcctcatgttccgcaccatcggcatcagcgacgcggaggcccgg
gcgaaattcggttacctgctggatgccctgtccttcggcgctccgccccatggcggcctc
gccctgggcctcgaccgcctggtcatgctgctggcgggcgaggacaacatccgtgaggtc
atcgccttccccaagaccgcccaggcccgctgcctcatgaccgatgcccccagccccgtg
gatgagcggcagctgcgggatctgcacctcctgactgacgccaagcagacctaccgggtg
ggcgccgtgttcttcgagagtgccgagggcgggaatgccgagctgcggggccaggccctg
caacagatcacccagctgaccccccgccaggcccagggcctggtcaccctggacgcccag
ggccagatcctcgacgcccaaaccctcagtggccccacttttgagttctga
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