KEGG   Geothrix sp. PMB-07: Q9293_13595
Entry
Q9293_13595       CDS       T09655                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
gep  Geothrix sp. PMB-07
Pathway
gep02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gep00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Q9293_13595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gep02022]
    Q9293_13595
Two-component system [BR:gep02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   Q9293_13595
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase AAA_2 HTH_AraC dnstrm_HI1420
Other DBs
NCBI-ProteinID: WLT30750
LinkDB
Position
3088634..3090013
AA seq 459 aa
MRTPITILLVDDEPGIRRSLGEALKDEGYHVVKAERGEQAIDLLHNPDGEGIQLVLLDVW
LPGIDGLETLKQAKQLRPELPVVMISGHANIDTALQATKLGAFDFLEKPIDLDRLLLVVG
NALRQSRLEQENQRLLAEVEGGRFFLADSPAMKRLMADVALVAPTEGRVLLTGENGSGKE
EVARLIHLQSPRKEAPFVEVNCAAIPEELIESELFGHQKGAFTGAVRDQKGKFREADGGT
LFLDEVGDMSLKTQAKVLRALQEGRVEPVGGGGAVGVDVRVIAATNKDLPAEITKGRFRE
DLFFRLAVVPLRLPALRERPEDILPLAEAFITRIAKQYGRPPRHLGPEAKDTLLRHDWPG
NVRELKNLMERAVILGRSSEIGPRDLGPLAARHLAEQDPFSFPEFTNLKDAKDWFESQYL
QREMKLQNGNMTRVAERVGMDRSNLYKRLKTLGIEPREN
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgtacccccatcaccatcctcctggtggatgacgaaccgggcatccggcggtccctg
ggcgaagccctgaaggatgagggctatcacgtggtgaaggccgagcggggtgagcaggcc
atcgacctgctgcacaaccccgacggcgagggcatccagctcgtgctgctggacgtgtgg
ctgccgggcatcgacggcctggaaaccctgaagcaggccaagcagctccggccagagctg
ccggtggtgatgatctctggccacgccaacatcgacacggccctgcaggccaccaagctg
ggcgcctttgatttccttgaaaagcccatcgacctggaccggctgctgctggtggtgggc
aatgccctgcgccagtcccgcctggagcaggagaaccagcgcctgctggccgaggtggag
ggcggccgcttcttcctggccgacagccccgccatgaaacggctcatggccgacgtggcc
ctggtggcgcccacggaaggccgcgtgctgctcaccggcgagaacggcagcggcaaggag
gaggtggcccgcctcatccatctgcagagcccccggaaggaagcccccttcgtcgaagtg
aactgcgccgccatccccgaagaactcatcgagagcgaactgttcggccaccagaagggc
gccttcaccggggccgtgcgcgaccagaagggcaagttccgcgaggccgacggcggcacc
ctgttccttgatgaagtgggcgacatgtcgctgaaaacccaggccaaggtactgcgggcc
ctgcaggagggccgcgtggagcccgtgggcggcggcggcgccgtgggcgtggatgtgcgc
gtcatcgccgccaccaacaaggatcttccggccgagatcaccaagggccgcttccgcgag
gatctcttcttccgcctggccgtggtgcccctgcgcctgcccgccctgcgcgaaaggccc
gaggacatcctgcccctggccgaagccttcatcacccgcatcgccaagcagtacggccgt
ccgccgcggcatctgggcccggaggccaaggacaccctgctgcgccacgattggccgggc
aacgtccgtgagctgaagaacctcatggagcgcgccgtcattctgggccgcagcagtgag
attggcccccgcgacctgggccccctggccgcccgccacctggccgagcaggatcccttc
tccttccccgaattcaccaacctgaaagacgcgaaggactggtttgaaagccagtatctg
cagcgcgagatgaagctccagaacggcaacatgacccgcgtcgccgagcgcgtgggcatg
gaccgctccaacctctacaagcgcctcaagaccctgggcatcgagcccagggagaactag

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