Geothrix sp. PMB-07: Q9293_14090
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Entry
Q9293_14090 CDS
T09655
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
gep
Geothrix sp. PMB-07
Pathway
gep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Q9293_14090 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gep03400
]
Q9293_14090 (mutS)
DNA repair and recombination proteins [BR:
gep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Q9293_14090 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Herpes_pp85
Motif
Other DBs
NCBI-ProteinID:
WLT30848
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Position
complement(3197082..3199604)
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AA seq
840 aa
AA seq
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MSTPMLQQIAALKREAGDAVLLTRMGDFYEILGEDAVRAAPVLEIALTLRGKGSESETPM
CGVPHFALESYLPKLLAAGFSAAIAEPTAKPEEVKGLLPRAIKRIITPGTWLDDDARWLC
ALHRVGSTWGLALLQLASGALRVLPGEGPDALRATLDRLNPQELILAEGAEDMADLEAAR
TRLPAWRFEASRAKQQVLAFFGWQHLEGVGLDPYPAALGALAALLDHVETTQKGRPAHLQ
GVSLELGAAGPLVDATSARHLEVLTNGLDGGRAGSLLALLDQCRTRLGTRLLKAWLEQPL
RDRPALERRWSQVAWLTEDRRRGPIQTLLAQVPDLDRLLGRVALGLATPPELAQLREGLA
VLQKLPAKIQDEGWAPEVAELGLWPEATPLCTPLLVELQRCLAEAPPLDLEKGGVIREGV
DGELDAVRRLARDAKQVMLELEEEERAASGINSLKIKYNRVFGYYFEITKANLGAVPAHF
LRKQTLANAERFTTEKLVAFEQKLLSAESDQVKLEAVQLQRLLALVLEHRADLTQLARAV
AALDVLAALAERARLSGWTRPELGEERELVLATARHPMLEARMGRECIPNDLQFSAVQPM
AVVTGPNMGGKSTFLRTAALLVVLAQTGSFVPAELMRFGLVDRIFTRIGASDQLAKGQST
FMVEMTETARILNQTTAASLVILDEIGRGTSTRDGLALAEAIALFLRDLKGGAPRTLFAT
HYFEMTKLADDSRIQNLHVEVQEWEEQLHFLHRVAPGPADRSYGIQVARLAGLPKTVIQK
AQRLLAQAPEAPPRAPMPSQPALPMFETEPDPLREELDALDLSRMTPLEALNWLALKQGR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccatgctgcagcagatcgccgccctcaaacgcgaggcgggcgacgccgtg
ctgctgacgcgcatgggcgatttctacgagatcctgggcgaggatgcggtgcgggcggcg
ccggtgttggagatcgcgctgaccctgcggggcaagggcagcgaatcggaaacgcccatg
tgcggcgtgccgcatttcgctctggaatcctacctgcccaagctgctggcggcgggcttt
tccgcggccatcgccgagcccacggccaagcccgaggaggtgaagggcctgctgcctcgc
gccatcaagcgcatcatcacgccgggcacctggctggatgacgatgcccgctggctttgc
gccctgcatcgtgtcggaagcacctggggcctggccctgctgcagctggcctcgggcgcc
ctgcgcgtgctgccgggcgagggaccggatgcgctgcgggccacgctggaccgcctgaat
ccccaggagctgattctggccgagggcgctgaagacatggccgatctggaggccgctcgc
acacgcctgcccgcctggcgcttcgaggcctctcgcgccaagcaacaggtgctggccttc
ttcggctggcagcatctggaaggcgtgggcctcgatccctaccccgcggccctgggcgcc
ctggccgcgctgctcgatcatgtggaaaccacccagaaggggcgccccgcgcacctgcag
ggcgtgtcgctcgagctcggggccgccggtcccctcgtggatgccaccagcgccaggcac
ctggaagtcctgaccaatggcctggacgggggacgcgctggatctttgctggccctgctg
gatcagtgccgcacccgcctcggcacccggttgctgaaggcttggctggagcagccgctg
cgggatcggcctgcgctggagcggcgctggtcgcaggtggcctggctcacggaggatcgc
cgccgcggtcccatccagacgctgctggcgcaggtgcccgatttggatcgtctgctgggt
cgcgtggcccttggtctcgccacgccgcccgaactggcgcagctccgtgagggcttggct
gtcctccagaaactgcctgcgaaaatccaggatgaaggttgggctcctgaggtggcggag
ctgggcctgtggcctgaggccacgccgctctgtacgccgttgctggtggagctgcagcgc
tgcctggccgaggcgccgccgctggatctggagaagggcggcgtcatccgcgagggcgtg
gatggggaactcgacgccgtgcgccgcctggcccgcgacgccaagcaggtgatgctggaa
ctggaggaggaggaacgcgccgcctcgggcatcaacagcctgaagatcaaatacaaccgg
gtgttcggctactacttcgagatcaccaaggccaacctcggcgccgtgcctgcgcatttc
cttcgcaaacagaccctggccaacgccgagcgcttcaccaccgagaagctggtggccttc
gagcagaaactgctgagcgccgagagcgaccaggtgaagctggaggccgtgcagctgcag
cggctgctggcactggtgctggagcaccgcgccgacctcacgcagctggcgcgggccgtg
gccgcgctggatgtgctggcggctctggcggaacgggcgcggctgtcgggttggacccgg
ccggagctgggcgaggaacgcgagttggtgctggctacggcccgccacccgatgctggaa
gctcggatgggccgcgagtgcattcccaatgacctgcagttctcggccgtgcagcccatg
gccgtggtgacgggcccgaacatgggtggcaaatccacctttctgcgcacggcggccctg
ctggtggtgctggcgcagacgggctcctttgttcccgccgagctcatgcgcttcgggctg
gtggaccgcatcttcacgcgcatcggcgcctcggatcagctggccaagggccagtccacc
ttcatggtggagatgacggagacggcgcgcatcctcaaccagaccacggcggccagcctg
gtgatcctggatgagatcggccgcggcacctccacgcgggatggcctcgctctggccgag
gccatcgccctgtttttgcgtgatttgaagggcggcgccccgcgcacgctctttgccacg
cactatttcgagatgaccaagctggccgacgacagccgcatccagaacctccatgtggag
gtgcaggagtgggaggaacagctccacttcctccaccgcgtggcgccaggtcccgccgat
cgcagctacggcatccaggtggcacggctggcggggctgcccaagaccgtcatccagaag
gcccagcggctgctggcccaggcccccgaagcgccgccccgcgcgcccatgcccagccag
cccgcccttccgatgttcgaaacggaacccgacccgctgcgggaggaactggacgccctc
gatctcagccgcatgactcctctggaagcgctgaactggctggccctgaaacaggggcgc
tga
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