Geothrix sp. PMB-07: Q9293_15305
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Entry
Q9293_15305 CDS
T09655
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
gep
Geothrix sp. PMB-07
Pathway
gep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q9293_15305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gep03000
]
Q9293_15305
Transcription factors [BR:
gep03000
]
Prokaryotic type
Helix-turn-helix
Other families
Q9293_15305
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
Mg_chelatase
AAA
GAF_3
ATPase
AAA_16
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WLT31084
UniProt:
A0AA50DRU8
LinkDB
All DBs
Position
complement(3524889..3526427)
Genome browser
AA seq
512 aa
AA seq
DB search
MVSSEVHRLSPLLEVSQALAVADLRVALPRALEILSEAFGAINGAILLADEEGKGLRIEA
ARGLSRQATERAHYKSGEGINGRVLASGKAVVLPRASQEPLFLDRTGVLKEQKRKKVELS
FFCVPVFLDQRTAGTLCLTVRHDPRRDYERDSKVLQIAASMVGLAMKVARLVAADRQRLV
EENQQLRLDLRERYDLRHLIGHSHAMQRVYEAVAQAAPSSTTVLIRGESGTGKELAAHAL
HYNSPRADKPFIKVSCGALPENLIESELFGYEPGAFTDARHQKKGRFELANGGTLFLDEV
GELSPATQVKLLRVLQEREFERLGGVSPVKVDVRLVAATHRDLEAAVRAGTFREDLYYRL
HVFELFMPPLRERQADIVLLADHFVEKIAAAQGKDVRRISTSAIDMLVAYHWPGNVRELE
NCIERAILVAEGGVIHAHHLPPSLQTAEVSDTLPGAGLADAVAAFERDLLQDALKSARGN
RSRAARLLQTTERILNYKVQKYGLEPERFRSA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggtctcctccgaggtccatcgcctttcgcccctcctggaggtgagtcaggccctggct
gtcgcagatcttcgggtggccctgcccagggcgctggagatcctttccgaagcctttggc
gccatcaacggcgccattctgctggcggatgaggaagggaagggactgcgcatcgaggcc
gcgcgggggctctcccggcaggccacggagcgggcccattacaagtcgggcgagggcatc
aatggccgagtcctggccagtgggaaggccgtggtgttgccccgggccagccaggaaccg
ctgttcctggaccgcactggcgtgttgaaggagcagaagcgcaagaaggtggagctgtcc
tttttctgcgtgccggtcttcctggatcagcgcacggcgggcaccctctgtctcacggtg
cgccacgatccccggcgtgactacgagcgggactccaaggtgctgcagattgccgcttcc
atggtgggcctggccatgaaggtggcgcggctggtggcggcggatcgccagcgcctcgtc
gaggagaaccagcagctgcggctggatctgcgggagcgctacgacctgcgtcatctcatc
ggccacagccacgccatgcagcgggtttacgaggccgtggcccaggcagcgcccagcagt
accaccgtgctcatccgcggcgagtccggcacgggcaaggaattggcggcccacgccctc
cactacaattcgcccagggctgacaagcccttcatcaaggtgagctgcggcgccctgccg
gagaacctcatcgagtcggagctgttcggctacgagcccggggccttcacggatgcccgg
catcagaagaagggccgcttcgagctggcaaacgggggcaccctgtttctggacgaggtg
ggcgagctgtctccggccacccaggtgaagttgctgcgggtgctgcaggagcgggagttc
gagcgcttgggcggtgtgagccccgtgaaggtggatgtgcgccttgtcgccgccacccac
cgcgacctggaggcggccgtgcgggccgggacctttcgagaggatctttactaccgcctg
catgtcttcgagctgttcatgcccccgctccgagagcggcaggcggacatcgtgctgctg
gcggaccactttgtggaaaagatcgccgccgcccagggcaaggatgtgcggcgcatttcc
acatcagccatcgacatgctggtcgcctaccactggcctggcaatgtgcgcgaactggag
aactgcatcgagcgggccatcctcgtggccgaggggggcgtcatccatgcccaccacctg
ccgccctcgctgcagaccgccgaagtgtccgacaccctgcccggagccgggctggctgat
gccgtggcggccttcgagcgggacctgttgcaggatgccctgaaatccgcccgcggcaac
cgttccagagctgcccggctgctgcagaccaccgagcggatcctgaactacaaggtgcag
aagtacggcctggagccggagcggttccgctcggcgtaa
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