Geothrix sp. PMB-07: Q9293_16040
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Entry
Q9293_16040 CDS
T09655
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
gep
Geothrix sp. PMB-07
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gep03021
]
Q9293_16040 (nusA)
03009 Ribosome biogenesis [BR:
gep03009
]
Q9293_16040 (nusA)
Transcription machinery [BR:
gep03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Q9293_16040 (nusA)
Ribosome biogenesis [BR:
gep03009
]
Prokaryotic type
rRNA transcription factors
Q9293_16040 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WLT31227
LinkDB
All DBs
Position
3681811..3683139
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AA seq
442 aa
AA seq
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MANVATTFFDSVKMIAAEKGIPEEDVFAAVEEALAKAADKYFNAQDFYGNFQAQMDRETG
EFHVYALKQVVAEVEEEDLEISLAEAQVLNPDAAEGDTLWLPQDTSQLGRIAAQAAKQVL
VQKVREAERERIFTEFADRIGEVVVAEVKRFEKSAIILEIDRVEAMLRRSEALRGDRFDK
GQRIKVVIVSVDRSAKDPQVQVSRTDPRLLIKLFENEVPEIHDGTVVIRNCVREAGDRAK
VAVHSLDPDVDPVGACVGLKGSRVQAIIRELKNEKIDIVRYSDDPAQFIANALNPAKAIR
VNLGDPEGRRVEVVVDDEQLSVAIGKRGQNVRLAAKLTGWNIDVRSEADKRREAEVAMGL
ALPEVHADTDEAEEAASPASSLLDTLQVEGLDAALAERLANAGYPDAKSLYTVTAEQLMQ
VEGMDQDLAFRLIDAVQAHFGE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgtcgcaacgacctttttcgacagcgtgaagatgatcgccgctgaaaagggc
atccctgaagaagatgtgttcgccgccgtcgaggaagccctcgccaaggccgctgacaaa
tacttcaatgcccaggatttctacggcaacttccaggcccagatggaccgggagaccggc
gagttccatgtctacgccctgaagcaggtggtggccgaagtggaggaagaggacctggag
atcagcctggctgaagctcaggtgctgaatccggatgctgccgagggcgacaccctgtgg
ctgccccaggacaccagccagctgggccgcatcgccgcccaggctgccaagcaggtgctg
gtgcagaaggtccgcgaggccgagcgcgagcgcatcttcaccgagttcgccgaccgcatc
ggtgaggtggtggtggccgaggtcaagcgcttcgagaagagcgccatcattcttgaaatc
gaccgggtggaagccatgctgcgccgcagtgaggcgctccgcggcgaccgcttcgacaag
ggccagcgcatcaaggtggtcatcgtcagcgtcgaccgcagcgccaaggatccccaggtg
caggtcagccggaccgatccgcggctgctcatcaagctctttgagaacgaagtgcctgaa
atccatgacggcaccgtggtcatccgcaactgcgtgcgcgaagcgggcgaccgcgccaag
gtggccgtccacagcctcgatccggatgtggatcccgtgggcgcctgcgtgggcctcaag
ggcagccgtgtgcaggccatcatccgcgagctgaagaacgagaaaatcgacatcgtccgc
tactccgacgatccggcccagttcatcgccaacgccctgaaccctgccaaggccatccgc
gtgaacctcggcgaccccgagggccgccgggtggaagtggtggtggatgacgagcagctc
agtgtcgccatcggcaagcgcggccaaaacgtgcgcctcgccgccaagctcacgggctgg
aacatcgacgtccgcagcgaagctgacaagcgccgcgaagccgaagtcgccatgggcctg
gccctccccgaggtccacgccgacactgacgaggcggaagaagccgcttcccccgcctcc
agcctcctcgacacgctccaggtcgagggtctggacgccgccctggcggagcgtctcgcc
aatgcgggctatcctgacgccaaatccctttacactgtcactgccgagcagctcatgcag
gttgagggcatggatcaggatctggccttccgtctcatcgatgccgtgcaggctcacttc
ggggagtag
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