KEGG   Geothrix sp. PMB-07: Q9293_16570
Entry
Q9293_16570       CDS       T09655                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
gep  Geothrix sp. PMB-07
Pathway
gep00521  Streptomycin biosynthesis
gep00523  Polyketide sugar unit biosynthesis
gep00525  Acarbose and validamycin biosynthesis
gep00541  Biosynthesis of various nucleotide sugars
gep01100  Metabolic pathways
gep01110  Biosynthesis of secondary metabolites
gep01250  Biosynthesis of nucleotide sugars
Module
gep_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:gep00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    Q9293_16570 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    Q9293_16570 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    Q9293_16570 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    Q9293_16570 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    Q9293_16570 (rfbB)
Enzymes [BR:gep01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     Q9293_16570 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 NAD_binding_4 3Beta_HSD RmlD_sub_bind adh_short KR NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: WLT31331
LinkDB
Position
complement(3809249..3810256)
AA seq 335 aa
MMPETILITGGAGFIGSNLVHRWHRNHPGDRILVLDKLTYAADSKQLEGLERVELVVGDI
QNLELARHLIESNHITKVFHLAAESHVDRSITGPAAFIQTNLLGTFSMLEAARQAWAGQK
DCRFLHISTDEVYGSLGEEGKFHEEMAYAPNSPYSASKAGSDHLVRAYHHTYGMDVVTTN
CSNNYGPRQHPEKLIPLAIMRMAKGEPIPIYGDGLNIRDWLFVEDHCSALETVMLNGVAG
ETYCVGGDNEQTNLALVDLLCDMVDQYLGRPQGTSRSLKTFVQDRAGHDRRYAINAFKVQ
SELGWNSEVTFEQGLQKTVSWYLHGFNSIISPAPH
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgatgcccgagacgattctcatcaccggcggtgccggtttcatcggcagcaacctggtg
caccgctggcaccgcaaccatcccggcgatcggatcctggtcctggacaagctgacctac
gcggccgactccaagcaactggagggcctggagcgggtggagctggtggtgggcgacatc
cagaacctggagctggcgcggcacctgatcgagtcgaaccacatcaccaaggtgtttcac
ctggcggcggagagccatgtggaccggagcatcacaggcccggcggccttcatccaaacc
aacctgctggggactttctccatgctggaggcggcgcggcaggcctgggctgggcagaag
gattgccggttcctgcacatcagcacggacgaggtatatggctctctgggggaggagggc
aagttccacgaagagatggcctacgcgcccaacagcccctacagcgccagcaaggctggc
agcgatcatctggtgcgcgcctaccaccacacctacggcatggatgtggtgaccaccaac
tgctccaacaactacggcccccgacaacaccccgagaagctgatccccctggcgatcatg
cgcatggccaagggcgagcccatccccatttacggcgatggcctgaacatccgggactgg
ctgttcgtggaagaccattgttccgcgctggagacggtgatgctgaatggcgtggcgggt
gagacctactgtgtgggcggcgacaacgagcagaccaatctggccctggtggatctgtta
tgtgacatggtggaccagtacctcgggcgcccccagggcaccagccgaagtctcaagact
ttcgtacaggatcgtgccgggcatgaccgacggtacgctattaatgccttcaaggttcag
agtgaattaggttggaactctgaagtgacttttgagcaaggattgcagaagacggttagc
tggtatttgcacggatttaattcaatcatcagcccagcgccgcattga

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