Geothrix sp. PMB-07: Q9293_16570
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Entry
Q9293_16570 CDS
T09655
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00521
Streptomycin biosynthesis
gep00523
Polyketide sugar unit biosynthesis
gep00525
Acarbose and validamycin biosynthesis
gep00541
Biosynthesis of various nucleotide sugars
gep01100
Metabolic pathways
gep01110
Biosynthesis of secondary metabolites
gep01250
Biosynthesis of nucleotide sugars
Module
gep_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Q9293_16570 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Q9293_16570 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Q9293_16570 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Q9293_16570 (rfbB)
00525 Acarbose and validamycin biosynthesis
Q9293_16570 (rfbB)
Enzymes [BR:
gep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Q9293_16570 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
RmlD_sub_bind
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WLT31331
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All DBs
Position
complement(3809249..3810256)
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AA seq
335 aa
AA seq
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MMPETILITGGAGFIGSNLVHRWHRNHPGDRILVLDKLTYAADSKQLEGLERVELVVGDI
QNLELARHLIESNHITKVFHLAAESHVDRSITGPAAFIQTNLLGTFSMLEAARQAWAGQK
DCRFLHISTDEVYGSLGEEGKFHEEMAYAPNSPYSASKAGSDHLVRAYHHTYGMDVVTTN
CSNNYGPRQHPEKLIPLAIMRMAKGEPIPIYGDGLNIRDWLFVEDHCSALETVMLNGVAG
ETYCVGGDNEQTNLALVDLLCDMVDQYLGRPQGTSRSLKTFVQDRAGHDRRYAINAFKVQ
SELGWNSEVTFEQGLQKTVSWYLHGFNSIISPAPH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgagacgattctcatcaccggcggtgccggtttcatcggcagcaacctggtg
caccgctggcaccgcaaccatcccggcgatcggatcctggtcctggacaagctgacctac
gcggccgactccaagcaactggagggcctggagcgggtggagctggtggtgggcgacatc
cagaacctggagctggcgcggcacctgatcgagtcgaaccacatcaccaaggtgtttcac
ctggcggcggagagccatgtggaccggagcatcacaggcccggcggccttcatccaaacc
aacctgctggggactttctccatgctggaggcggcgcggcaggcctgggctgggcagaag
gattgccggttcctgcacatcagcacggacgaggtatatggctctctgggggaggagggc
aagttccacgaagagatggcctacgcgcccaacagcccctacagcgccagcaaggctggc
agcgatcatctggtgcgcgcctaccaccacacctacggcatggatgtggtgaccaccaac
tgctccaacaactacggcccccgacaacaccccgagaagctgatccccctggcgatcatg
cgcatggccaagggcgagcccatccccatttacggcgatggcctgaacatccgggactgg
ctgttcgtggaagaccattgttccgcgctggagacggtgatgctgaatggcgtggcgggt
gagacctactgtgtgggcggcgacaacgagcagaccaatctggccctggtggatctgtta
tgtgacatggtggaccagtacctcgggcgcccccagggcaccagccgaagtctcaagact
ttcgtacaggatcgtgccgggcatgaccgacggtacgctattaatgccttcaaggttcag
agtgaattaggttggaactctgaagtgacttttgagcaaggattgcagaagacggttagc
tggtatttgcacggatttaattcaatcatcagcccagcgccgcattga
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