Geothrix sp. PMB-07: Q9293_17220 Help Entry Q9293_17220       CDS       T09655                                  Symbol lpdA Name (GenBank) dihydrolipoyl dehydrogenase   KO K00382   dihydrolipoyl dehydrogenase [EC:1.8.1.4] Organism gep  Geothrix sp. PMB-07 Pathway gep00010   Glycolysis / Gluconeogenesis gep00020   Citrate cycle (TCA cycle) gep00260   Glycine, serine and threonine metabolism gep00280   Valine, leucine and isoleucine degradation gep00310   Lysine degradation gep00380   Tryptophan metabolism gep00620   Pyruvate metabolism gep00630   Glyoxylate and dicarboxylate metabolism gep00640   Propanoate metabolism gep00670   One carbon pool by folate gep00785   Lipoic acid metabolism gep01100   Metabolic pathways gep01110   Biosynthesis of secondary metabolites gep01120   Microbial metabolism in diverse environments gep01200   Carbon metabolism gep01210   2-Oxocarboxylic acid metabolism gep01240   Biosynthesis of cofactors Module gep_M00009   Citrate cycle (TCA cycle, Krebs cycle) gep_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate gep_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA gep_M00621   Glycine cleavage system Brite KEGG Orthology (KO) [BR:gep00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     Q9293_17220 (lpdA)    00020 Citrate cycle (TCA cycle)     Q9293_17220 (lpdA)    00620 Pyruvate metabolism     Q9293_17220 (lpdA)    00630 Glyoxylate and dicarboxylate metabolism     Q9293_17220 (lpdA)    00640 Propanoate metabolism     Q9293_17220 (lpdA)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     Q9293_17220 (lpdA)    00280 Valine, leucine and isoleucine degradation     Q9293_17220 (lpdA)    00310 Lysine degradation     Q9293_17220 (lpdA)    00380 Tryptophan metabolism     Q9293_17220 (lpdA)   09108 Metabolism of cofactors and vitamins    00785 Lipoic acid metabolism     Q9293_17220 (lpdA)    00670 One carbon pool by folate     Q9293_17220 (lpdA)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:gep04147]     Q9293_17220 (lpdA) Enzymes [BR:gep01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      Q9293_17220 (lpdA) Exosome [BR:gep04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    Q9293_17220 (lpdA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA HI0933_like FAD_binding_2 NAD_binding_8 3HCDH_N Thi4 AlaDh_PNT_C FAD_binding_3 DAO Lys_Orn_oxgnase 2-Hacid_dh_C PBCV_basic_adap Motif Other DBs NCBI-ProteinID:  WLT31453 LinkDB All DBs Position complement(3945157..3946560) Genome browser AA seq 467 aa AA seqDB search MAQFDLIVIGSGPGGYVAAIRAAQLGLNTALVERDAVLGGTCLHRGCIPAKTWLETAHRL EQMQDADTYGIDGVDGKALKPNLTAIVKRKGRIVLKNAKGIEFLMKKNKVTVLKGFGKLL GGGKVDVNGEVHEAKRIILATGSSPKPIPGLETDGKQVLNSDHILDITELPTHLVILGAG AIGVEFASVFSRLGSKVTLVEFMDTILPLEDEDIGLELAKIFKKSYKIDVRTKTKITRIE KRADGVVCHLEGETPGEVVGSHLLVAVGRAPQVEGIGLEKTKAQVDRGCVVIDKFMQTGE PGLYAIGDIVRTPWLAHVASDEGIVAAEHAAQSLGKDVHPHPIRYDRFPACTYCDPEVGS IGLSEKAAKAKGHDVQVGSFPFSPMAKANIVGEPHGFIKIVADKQYGEILGIHILGPKAT ELVASSVALMGGEFTVDELIHTMYPHPTLNEVFPEAARAVYGRALNM NT seq 1404 nt NT seq  +upstreamnt  +downstreamnt atggcccagttcgacctcattgtcatcggctccggccccggcggctatgtggctgccatt cgtgcggcccagctgggactgaacacggccctcgtcgagcgggatgccgtcctcggcggc acctgcttgcatcggggttgcatcccggccaagacctggctggagacggcccaccggctc gagcagatgcaggacgctgatacctacggcatcgacggcgtggacggcaaggccctcaag cccaacctgacggccatcgtgaagcgcaaggggcgcattgttttgaagaacgccaagggc atcgagttcctcatgaagaagaacaaggtgaccgtgctgaagggcttcggcaagctgctg ggtggcggcaaggtggatgtgaacggcgaggtgcacgaggccaagcgcatcatcctcgcc acgggctcgtcgcccaagcccatccccggtctggagactgacggcaagcaggtgctgaac agcgaccacatcctggacatcacggaactgccgacccacctggtgatcctgggcgccggc gccatcggcgtggagttcgcttccgtgttcagccgcctgggctccaaagtgaccctggtg gaattcatggacaccatcctgccgctggaggatgaggacatcggcctggagctggcgaag atcttcaagaagtcctacaagatcgacgtgcgcaccaaaaccaagatcacccgcatcgag aagcgggccgacggtgtggtgtgccacctggagggtgagacccccggcgaggtcgtgggc agtcacctgctggtggccgtgggccgcgcaccccaggtggagggcatcggcctggagaag accaaggctcaggtggatcgtggctgcgtggtcatcgacaagttcatgcagaccggtgag cccggcctctacgccatcggcgacattgtgcgcaccccctggctggcccacgtggccagc gacgaaggcatcgtggccgccgagcacgccgctcagagcctgggcaaggacgtgcatccc caccccatccgttacgaccgcttccccgcttgcacctactgcgatcccgaagtgggctcc attggtctcagcgaaaaggcggccaaggccaagggccatgatgtgcaggtgggcagcttc cccttctcgcccatggccaaggccaacatcgtgggtgagccccacggcttcatcaagatc gtggccgacaaacagtacggcgagatcctgggcatccacatcctgggccccaaggccacg gagctggtggcctccagcgtggcactcatgggtggcgagttcacggtggatgaactcatc cacaccatgtatccgcaccccaccctgaacgaagtgttccccgaggccgcccgcgccgtc tacggccgcgccctcaacatgtag

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