KEGG   Geothrix sp. PMB-07: Q9293_17785
Entry
Q9293_17785       CDS       T09655                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
gep  Geothrix sp. PMB-07
Pathway
gep02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gep00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Q9293_17785
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gep02022]
    Q9293_17785
Two-component system [BR:gep02022]
 NtrC family
  HydH-HydG (metal tolerance)
   Q9293_17785
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 AAA_5 HTH_8 AAA Mg_chelatase bpMoxR AAA_3 AAA_2 AAA_16 RsmI_C HTH_17
Other DBs
NCBI-ProteinID: WLT31558
LinkDB
Position
4059577..4061019
AA seq 480 aa
MRLELGLQVLERRADQRLAQHLLALQVIADRAQSPRHQRRLGELWPHTDTASAPTTALLV
DGWLAQRGLPTWIAWEEKGALHTLGAGDPPPEGTLSRLAKDGSLAPFLQNGWVWRGHPLF
WEGCPVGAVLLGQRPDTPPVPPSEPLLLAPWISDLRAQRPSASPLDPGLLLTDGSDPMAS
VLRELDRVAGSELPVLILGPTGSGKELAAGEVHQRSGRQGPLVAVNCSAFAEGLLESELF
GHVKGAFTDAHRDRRGAIEMARGGTLFLDEVADLSPRLQSLLLRVLQEREIRRVGSDHAV
KVDVRFVAATHRPMEDLAAAGSFRRDLLFRLQGAVLNLPALCERRHEFPFLLPHLTLRAA
EAVKRPVPALAPGLAQALSRLPWPGNVRELLHALERAILRCEDGALRPRHFPELDVPLLQ
SRTWDEATRTFQRRLLLDTLQACQFRVAEAAEILGLARPALYATAKRLGIDLVAERLAKP
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgaggttggaactgggactgcaggttctggaacgtcgggcggaccagcggctggcccaa
cacctgttggcgcttcaggtcattgccgatcgggcccaatcgcctcggcaccaacggcgc
ctgggagagctttggcctcatacagacacggcgtccgcacccacaaccgccttgctggtg
gatgggtggctggcccagcgcggccttccgacctggatcgcctgggaggagaagggcgcc
ctgcatacgctcggcgccggggatccaccccccgaaggcaccctcagtcggctggcgaag
gatggcagccttgctcccttcctgcagaacgggtgggtgtggcgaggccacccactgttc
tgggagggatgtccggtgggggctgtgttgctgggccaacgcccggatacgcctccagtt
cccccctcggaacccctgctcctcgcgccttggatctcggacctgcgcgcccagcgaccc
tccgcctcccctcttgatccgggccttctgctgacagacggcagcgaccccatggccagt
gtgcttcgagagttggaccgggtggcgggatcagagctgccggtattaatcctgggcccc
acgggcagcggcaaggaactggcagctggcgaggtccaccaacgctcgggacgccagggg
cccctagtggccgtcaattgttccgccttcgccgaaggcctgctggaatcagagctcttc
ggccatgtgaagggcgccttcacggatgcccaccgggaccggcgcggcgccatcgagatg
gccaggggcggcacactgttcctggatgaggtggcggacctgtcgccgcgactgcagtcc
ctgcttttgcgggtgctccaggagcgggaaatccgccgggtgggatcggaccatgccgtg
aaggtggatgtgcggttcgtggcggccacccaccgccccatggaggatctggccgcagcc
ggatccttccggcgggatctgctcttccggttgcagggtgctgttctgaacctgcccgcc
ctgtgcgagcggcgccatgaattcccttttctcctgccccatctcacgctccgggccgcc
gaagcggtgaaacgaccggtaccggccctggcaccggggctggcacaggcgctgtcccgc
ctcccctggcctggcaatgtgcgggagctgctgcacgccctcgaacgggccatcctccgc
tgcgaggatggcgccctgcggccgaggcattttcctgagctcgacgtgcccctgcttcag
tcccgcacctgggacgaagccacccgcaccttccagcggcgcctgctgctggacaccctg
caggcctgccagttccgcgtggccgaggcggccgagatcctcggcctcgcccgaccggcg
ctctacgccaccgccaagcggctgggcatcgacctggtggccgaacgcctagccaagccc
taa

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