Geothrix sp. PMB-07: Q9293_18460
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Entry
Q9293_18460 CDS
T09655
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00030
Pentose phosphate pathway
gep01100
Metabolic pathways
gep01120
Microbial metabolism in diverse environments
gep01200
Carbon metabolism
Module
gep_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Q9293_18460 (edd)
Enzymes [BR:
gep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
Q9293_18460 (edd)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
WLT31690
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Position
4209734..4211575
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AA seq
613 aa
AA seq
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MALNPHVAALTDRIRQRSHVSRNAYLAQIREAASATPHRCLVSCANLAHSFAASGADKAA
LREGRQPNIGIVTAYNDMLSAHQPLEAYPAWIRQAARAAGATAQVAGGVPAMCDGITQGQ
PGMELSLFSRDVIAMSTAVALSHSVFDAALCLGVCDKIVPGLLIGALQFGHLPVLFVPGG
PMVTGISNEEKARVRQRAAAGEADRAELLESEAKAYSAPGTCTFYGTANSNQMLMEIMGL
HLPGTAFVPAGSPLREALTRRSAARAVELVAGGSEYTPLGLVIDERAIVNGMVGLLATGG
STNHTLHLVAIARAAGIHIDWSDFDTLSAQVPLLARVYPNGEADVNAFHKAGGMGFLIRE
LLNAGLLHDDVLTVAGPGLRPYTQAPELEPKTKALVWREAPAQSRDEEILRPFLRPFSHN
GGLRLLTGNLGRSVIKVSSVKPEYRHILAQARVFDSQEALQAAYQAGSLNRNVVVVVRFQ
GPRANGMPELHQLTPPLANLLDRGYRVALITDGRMSGASGKVPAAIHASPEALAGGPLAK
IQDGDLIELDAERGTLEVRVDPAEWALRPLAQPPSTGHDRGLGRELFGLFRAHATTAEAG
ATSFGPSFDRTLP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaatccccatgtggcagccctgactgatcgcatccggcagcgcagccacgtc
agccggaacgcctacctggcgcagatccgggaggccgcttccgccacacctcaccgctgc
ctggtctcctgcgcgaacctggcgcacagcttcgcggcctcgggggcggacaaggcggcc
cttcgtgaaggccgccagcccaacatcggaatcgtgaccgcctacaacgacatgctctcc
gcccaccagccgctggaggcctatcccgcctggatccgtcaggcggcccgtgccgcgggc
gccacggcccaggtggccgggggcgtgcccgccatgtgcgatggcatcacccagggccag
cccggcatggagctgtcgctcttctcccgtgatgtgatcgccatgagcacggcggtggcc
ctttcccacagcgtcttcgacgcggcgctctgcctcggggtgtgcgacaagatcgtcccc
ggcctgctcatcggggcccttcagttcggccatttgccagtgctcttcgtgcccggcggg
cccatggtgacgggcatctccaacgaggagaaggcccgcgtgcgccagcgcgccgccgcc
ggtgaagcggaccgcgcggagctgctggagtcggaggccaaggcctattcggcgcctggc
acttgtaccttctacggcaccgccaacagcaaccagatgctcatggaaatcatgggcctg
cacctgcccggcaccgccttcgtgcccgcgggcagccctctccgtgaggccctcacgcgc
cgctcggcggcccgcgccgtggagctggtcgcaggtggctccgaatacacgccgctgggc
ctggtcatcgatgagcgggccatcgtgaacggcatggtgggcctgctggcgaccggtggc
tccaccaaccacaccctgcacctggtggccatcgcccgagctgcgggcatccacatcgac
tggagcgatttcgacacgctctcggcccaggtgcccctgctggccagggtgtaccccaat
ggcgaagccgatgtgaatgccttccacaaggcgggcggcatgggcttcctcatccgcgaa
ctgctcaacgccggtctcctccatgacgacgtcctcacggttgccgggccgggcctgcgc
ccctacacccaggcgccggagctggaacccaagaccaaggccctggtgtggcgcgaagcc
cccgcccagagccgcgacgaggagatcctgcggcccttcctgcggcctttctcccacaac
gggggcctgcgcctgctcacaggcaacctgggtcgctcggtcatcaaggtctcatcggtg
aagcccgagtaccgccacatcctggcccaggcccgggtcttcgacagccaggaggccctg
caagccgcctaccaggcgggcagcctgaaccggaacgtggtggtggtggtgcgtttccag
gggccccgcgccaacggcatgcctgagctgcaccagctcacgccccccctggcgaacctg
ctggaccgcggctaccgcgtggcactgatcacagacggccgcatgtccggcgcctccggc
aaggtgcccgccgccatccatgcctcgcccgaggccttggcgggtgggcctctggccaag
atccaagatggcgatctcatcgaactggatgcagagcggggcaccctggaagtgcgggtc
gatcccgccgaatgggccctgcgccccctggcgcaaccgcccagcaccggccatgatcgg
ggcctgggccgggagctcttcgggcttttccgggcccacgccaccaccgccgaagccgga
gccacctccttcgggcccagctttgatcggacgctgccatga
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