Geothrix sp. PMB-07: Q9293_18545
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Entry
Q9293_18545 CDS
T09655
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00260
Glycine, serine and threonine metabolism
gep00270
Cysteine and methionine metabolism
gep00450
Selenocompound metabolism
gep00670
One carbon pool by folate
gep01100
Metabolic pathways
gep01110
Biosynthesis of secondary metabolites
gep01230
Biosynthesis of amino acids
Module
gep_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Q9293_18545
00270 Cysteine and methionine metabolism
Q9293_18545
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Q9293_18545
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Q9293_18545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gep04147
]
Q9293_18545
Enzymes [BR:
gep01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
Q9293_18545
Exosome [BR:
gep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Q9293_18545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WLT31707
LinkDB
All DBs
Position
complement(4228771..4229964)
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AA seq
397 aa
AA seq
DB search
MPKPWGPTTTAIHAGKHFNPTRAVTTPIFQTSVFQLLENREGAEFAASVEPPAFYTRWGN
PNTSEVEAVLAELEGAERALATASGMSAFALVFEAFLKSGDHLVAPAAIYLGTEQLIRRW
ETERGLQVTWVKNSLDLGEWEAAVRPNTRLIWVETPSNPTLAMTDLAGVAALGRKHGIRT
VADNTFPSPIHTKPRAFGIDLSVASATKYLAGHSDVVAGVVAGCEADVVACWHLSKLVGP
TLDPMAAWLLHRGLKTLALRVRRASDNAQALAQWLLWQPHVARVDYPGLPTHPGYDIALR
QMEKGFGAMVGFELRAGLLAGQRFCEALEVITRGVSLGGVESLIQHPASMSHLRTAPEVK
ARLGITDGLLRFSVGIEDQPDLIADLEKGFQAAAEAR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaccctggggacccaccaccaccgccatccacgccgggaagcatttcaatccc
acccgggccgtgaccacgcccatttttcaaacctcggtcttccagcttttggagaaccgg
gaaggggccgaattcgctgccagtgttgaaccaccggccttctacacccgctggggcaac
cccaacaccagcgaggtcgaggcggtgctggcggaattggagggggccgagcgggctttg
gccacagcctcaggcatgtcggccttcgccctggtgttcgaggccttcctcaagagcggt
gatcatctggtggctccggccgccatctacctgggcaccgaacaactcatccggcgctgg
gagacggagcgaggcctccaggtcacctgggtcaagaacagcttggacctgggggaatgg
gaggccgccgttcgcccgaacacccgcctgatctgggtggagacgccctccaatcccacc
ctggccatgaccgatctcgccggggtggcggccctgggtcggaagcacgggatccgcacg
gtggccgataacaccttccccagccccatccatacgaagcctcgggcgttcggcatcgat
ctcagcgtggcttcggccaccaagtatctggccgggcattcggacgtggtggcaggtgtg
gtggcaggctgcgaggcggacgtggtggcgtgttggcacctcagcaagctggtcgggccc
acgctggatcccatggccgcctggctgcttcaccggggcctcaaaaccctggccctgcgg
gtgcgccgtgcttcggacaacgcccaggccctggcccaatggcttctctggcagccccat
gtggcccgggtggactatccgggtctgcccacccatccaggctacgatatcgccctgcgc
cagatggagaaggggtttggggccatggtgggctttgaactgcgggctggactcctggcg
ggacagcgcttctgtgaggccctggaggtgatcacccggggagtgagcctgggtggcgtg
gaaagcctcatccagcatccggccagcatgagccatctgagaaccgcccccgaggtgaaa
gctcgtctaggcatcacggatggtttgttgcgcttttccgtgggcatcgaggaccaaccc
gatctcattgcggatctggaaaaggggttccaggctgccgcggaggcccgatga
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