Gemella sp. ND 6198: CG018_01175
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Entry
CG018_01175 CDS
T05584
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
geq
Gemella sp. ND 6198
Pathway
geq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CG018_01175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geq03400
]
CG018_01175
Enzymes [BR:
geq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CG018_01175
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CG018_01175
DNA repair and recombination proteins [BR:
geq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CG018_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_L37ae
Motif
Other DBs
NCBI-ProteinID:
AXI26148
UniProt:
A0AAD0VB19
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All DBs
Position
complement(247685..248545)
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AA seq
286 aa
AA seq
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MPELPEVENIKFGLENKLKEKKIIEVTFSEVVQNGHSTGKQTIVKQDLLEFRKNIVKKTI
YNVVRRGKYLYFILDKGYLIIHFGMTGAFFVVKDVREIDNKNYYKHRHVIFNLNTGEKLV
FSDIRRFGELRYIDDITTFKPFNNLAPEPFDLGTEQYFISKLNEKKYKEQSIKALLLDGN
VFCGCGNIYDCEVLYRRKIHPLTTADKLSLSDKKGLFRELVNILAFAIKEGGSTISDYVH
TDGGEGNMQNFHQIYGKKNCPIGHNVEKIEIKGRASYFCPICQKRK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaaaatataaaatttggtttagaaaacaaattaaaagaa
aagaaaattattgaagtaactttttccgaagttgtacaaaatggtcattctaccggtaag
caaacaatagtaaagcaagatttattggaatttagaaaaaatattgtaaaaaaaactatt
tataacgttgtacgccgagggaaatatttatattttattttagataaagggtatcttatt
atccatttcggaatgacgggagctttttttgtagtaaaggacgtaagggaaatagataat
aagaattattataaacatcgacatgttatttttaatctaaataccggagaaaagttggtg
tttagtgatattcgtcgttttggagagttaaggtatatagatgatattacaacatttaaa
ccttttaacaatctagcgccggaaccgtttgatttaggaactgaacaatattttatatct
aaattgaatgagaaaaaatataaagaacaatcgataaaagcactgcttcttgacgggaat
gttttttgcggttgtggtaatatttatgattgtgaagtgctatatagaagaaaaattcat
ccgttaactacagctgataaacttagtttatcagataagaaaggattatttagagaatta
gttaatattttagcgtttgcgattaaagaaggtggctcaacaatttctgattatgttcat
actgacggtggagaaggaaatatgcaaaattttcatcaaatatatggtaaaaagaattgt
cctataggtcataatgttgagaagatagaaataaaaggtagagcgagttatttttgtccg
atttgtcagaaaagaaaataa
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