Gemella sp. ND 6198: CG018_03965
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Entry
CG018_03965 CDS
T05584
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
geq
Gemella sp. ND 6198
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geq03400
]
CG018_03965
DNA repair and recombination proteins [BR:
geq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CG018_03965
Archaeal homologous recombinant proteins
CG018_03965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
ABC_tran
ABC_ATPase
T2SSE
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXI26626
LinkDB
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Position
875079..878105
Genome browser
AA seq
1008 aa
AA seq
DB search
MKPIRLELQEFGPYKHEIIEWSKIINEPIFLITGKTGAGKSTLFDAMVYALYNKTSGGKN
IDSLRSKTADDKIKTKVIFDFEIKEKRYRLERTLAYLKKGNRSLTPGKVEFMQINGDNIK
VIASKETTVNEKVIELLGLDDKQFCQIIILPQGEFKKLLLSKSSEKAAILRSLFNTYLYQ
KFVEKLQNYAKELASEYKVKEKELINRFSHFKFSNKLEEVEYLQENSFDNLKEELKKQEQ
EKNNLDQDLKEKEMEFLKLQNKYLELGKVDDKFIQLDNYNNEYENLQAKEENIANLNQII
EKLEELGKNKHKIELYYTLLEKIKNEKDKSEELIKKKENYIKELEKNNNLGDYLKNIAET
KEKELEYVEERSYFYNNINSYKEAFFDEKKYLLEISNLEADKNKLREYKIGLEEQIAKQK
EIEEDNIVVEKEFNNIKLEILKKEYEVENLENYYNLTTEIENKLKKVKADKTKLEGLLIT
KKELENKVAEIEKNKNRELINNLVEKLHIGDDCPLCKQKIKHLPKKENVVQLDSNFKDEL
ENITREIIKLETTFQKNKEDISELEKKSATLKMEINKQAAEELEELSNNESRLKEKSDKI
KQSLKKIQKAVNESEKEIVQLEEVLQKEQSYKEKLLSAQIKISQYKEKIKVNVDDFEKYY
NSLLDRIKDFQKKEKIYIETKNNLVLADAKLDFEIKNNVEQFEKLEIDKSNLTEEFNNSK
LKQYYNSIETANDNLSEIKKLEEYRLTVKEYNNNVNMLLNNIERLKKELLGKQRPQLEQI
KLELDKKGNSLEEIKKEAVVLETIFNTNNELYNALLGEYNIWKKDVGNSNEIIHLSNVIS
GKTDNKKSLETYVQGYYLDLILEAGSRRFLKMSEGRYSFIRKLERQKGNGLQGLDIEVYD
VNSNSNRDVSSLSGGELFLASLSLALGLAEIIQQESGSISLETIFIDEGFGSLDSETLDT
AISTLIELQSYGRNIGIISHVSELKERVRAGVEVYSDNNSSKVKIVGI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattagattagaattacaggagtttggaccatataaacatgaaataatagaa
tggagtaaaataataaatgaaccgatatttcttataacaggaaaaaccggtgcaggaaaa
tcaactttgtttgatgcaatggtttatgcactttataacaaaactagcggtggtaagaat
attgatagcttacgctcaaaaactgccgatgataaaattaagacaaaggttatttttgat
tttgagataaaagaaaaacgctatcgtttagaaagaacgttagcgtatcttaaaaaagga
aacaggtcgctaacacccggtaaagttgaatttatgcaaataaacggcgataatataaaa
gttattgcgagtaaagaaacaacggtgaatgaaaaagtgatagaactgttagggcttgat
gataaacaattttgtcaaattataattttgccacaaggagaatttaaaaagctgttactc
tcaaaatcatcagaaaaggctgcaattttacgctcattatttaatacttatttataccaa
aaatttgtagaaaaattacaaaattacgctaaagaattagcgagtgaatacaaggtaaaa
gaaaaagaattgataaatagatttagtcattttaaattttcaaataagttggaagaggta
gaatatctccaagaaaatagttttgataatttaaaagaggagcttaaaaaacaagaacaa
gaaaaaaataatttagatcaagacttaaaagaaaaagaaatggagtttttaaaacttcaa
aataagtatttagagttaggtaaagtagatgataagtttattcagttggataattacaat
aatgaatatgaaaacttacaggctaaagaagaaaatattgcaaaccttaatcaaataata
gagaaattagaagaattggggaaaaataaacataaaatagagttgtattatactttgttg
gaaaaaataaagaacgaaaaagataaaagcgaagaattaataaagaaaaaagaaaattat
attaaggaattagagaaaaataataatttaggagattatttaaaaaatattgccgaaaca
aaagaaaaagaattagagtatgtagaagaaagaagttatttttacaataatattaacagc
tataaggaagcattttttgatgaaaaaaaatatcttttggaaattagtaatttagaagct
gataagaacaaacttagggaatataaaataggtttggaagaacaaatcgctaaacaaaag
gaaatagaagaagataatatcgtagtggaaaaagaattcaataatattaagctggaaatt
ttaaagaaagaatatgaagtagaaaatctggaaaattattataacttaacaacagaaata
gaaaataaattaaaaaaagttaaggctgataagactaaattagaggggttactaataact
aaaaaagagttggaaaataaagtagctgaaatagaaaaaaataaaaatagagaattaata
aataatttagtggagaaacttcatattggtgatgattgtccactttgcaagcaaaagata
aaacatcttcccaaaaaagaaaatgtagttcagttagattctaattttaaagatgagttg
gaaaatattacaagggaaataataaaattggaaacaacattccaaaaaaataaagaagat
atttctgaattggagaaaaaatctgctacgctgaaaatggagataaataaacaagcagcc
gaagagttggaagaattaagtaataacgagagcagattaaaagagaaaagtgataaaata
aaacaaagtttaaaaaaaatacaaaaagctgtaaatgagtcggaaaaagagatagtacaa
ttagaagaagttttgcaaaaagaacaaagctataaggaaaaattattatccgctcaaatt
aaaataagtcaatataaagaaaaaataaaagttaatgttgatgattttgaaaaatattat
aattcgctactggacagaataaaagattttcagaaaaaagaaaaaatatatatcgaaaca
aaaaataatttggtgcttgctgatgctaaattagattttgaaataaaaaataatgtagag
cagtttgaaaagttggaaattgacaaaagtaatttaacagaagaatttaataattcaaaa
ttaaaacaatactataatagtattgaaactgccaatgataatttgtctgaaataaaaaaa
ttagaggaataccgtttaacggtaaaagaatataataataacgtaaatatgttattgaat
aatattgagagattgaaaaaagaactgctaggaaaacaacgcccacagttggaacaaata
aaactagaattggacaaaaaaggaaattccttagaggaaataaagaaagaagcggttgtc
cttgaaacaatttttaacacaaataatgagttgtataatgctttactgggtgaatataat
atatggaaaaaagatgttggtaacagcaacgaaattatccatttaagtaatgttatcagc
gggaaaaccgataacaaaaaatcccttgaaacatatgttcaaggttattatcttgatctg
atattagaagccggctcaaggcgatttttaaaaatgagcgaggggcgttacagttttata
agaaaattagaacgtcaaaaaggtaatggacttcaaggtttggatatagaagtatatgac
gttaattcaaacagtaacagagatgttagttctctttccggaggtgagttatttttagct
tcgctatccctagcattaggacttgctgaaattattcagcaagaaagcggcagtatttct
cttgaaacgatttttatagatgaggggttcggttcattagacagcgaaacactcgatact
gccatctcaactcttattgaattgcagtcatatggtagaaatatcggaataatatcccat
gttagtgaattaaaagagcgggtacgagccggagtggaagtatattctgataataattca
tcaaaagtaaaaatagtaggtatttaa
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