Gemella sp. ND 6198: CG018_05460
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Entry
CG018_05460 CDS
T05584
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
geq
Gemella sp. ND 6198
Pathway
geq00260
Glycine, serine and threonine metabolism
geq00460
Cyanoamino acid metabolism
geq00630
Glyoxylate and dicarboxylate metabolism
geq00670
One carbon pool by folate
geq00680
Methane metabolism
geq01100
Metabolic pathways
geq01110
Biosynthesis of secondary metabolites
geq01120
Microbial metabolism in diverse environments
geq01200
Carbon metabolism
geq01230
Biosynthesis of amino acids
geq01240
Biosynthesis of cofactors
geq04981
Folate transport and metabolism
Module
geq_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CG018_05460 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CG018_05460 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CG018_05460 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CG018_05460 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CG018_05460 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CG018_05460 (glyA)
Enzymes [BR:
geq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CG018_05460 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AXI26882
UniProt:
A0AAD0VBQ8
LinkDB
All DBs
Position
complement(1193455..1194672)
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AA seq
405 aa
AA seq
DB search
MDKIFELIEKEKDRQNTNIELIASENFVSENILKATGSILTNKYAEGYPGKRYYDGCEVI
DEIETLAIERLKKLFNAEFVNVQAHSGSSANIAVYMALLNPGDTVLGMSMDSGGHLTHGS
RVNFSGKIFNAISYGVTKDTHLINYDEVLKLAKEYKPKMIIAGASAYSRIIDFKKFREIA
DEVNAYLMVDMAHIAGLVATKLHPSPLPYADVVTSTTHKTLRGPRGGIILTNNEKIATKI
NKMIFPGAQGGPLEHIIAAKAICFNEALQPSFKLYQQQVLNNMKAMVKTFKQNNIPVVSN
GSDNHLCLIDTFTTYGINGHDASDLLSKAYITCNKNGIPFDTLPPAKTSGLRLGTAAMTT
KGYVEEDFIEITNIICNLLKNGKSYLPAAQLEVKKITSKKRKEFR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatttttgaacttattgaaaaagaaaaagatcgtcaaaatacaaatattgaa
ctcattgctagtgaaaattttgtttcagaaaatatactaaaagcaaccggaagtattctt
accaataaatatgccgagggttatcccggaaaaagatattatgacggctgtgaagttatt
gatgaaatagaaactcttgctattgaaagactaaaaaaattatttaatgctgaatttgtc
aatgttcaagctcattccggttctagtgctaatattgcagtttacatggctttactaaat
ccgggggatactgttcttggtatgagcatggattcgggaggacatttaacacatggtagt
cgtgtaaacttctccggaaaaatatttaatgctatctcctatggcgtcactaaagatact
catcttatcaattatgatgaagtgttaaaacttgcaaaagagtataaacctaaaatgatt
atagccggggcgagtgcttattctcgtataatagattttaaaaaatttagagaaattgcc
gatgaagtcaatgcttacttaatggttgatatggctcatatcgcagggcttgttgctact
aaattacatccttctccattaccttatgctgacgttgtaacttctaccacacataaaact
cttcgtggccctcgtggaggaattatattaaccaataacgaaaaaatagctactaaaatc
aacaaaatgattttcccgggagcccaaggcggtccgttagagcatattattgcagcaaaa
gcaatctgctttaatgaggctttacaaccatcatttaaactttatcaacaacaagttcta
aataacatgaaagctatggttaaaacttttaaacaaaataatattcctgttgtaagtaac
ggaagtgataatcacctttgtttaatagatacctttactacttacggtattaacggtcat
gatgccagtgatttactaagtaaagcatatatcacatgtaacaaaaacggtatcccgttt
gatacgttaccgccggcaaaaacaagcggacttcgtttaggtacagcggctatgactact
aaagggtatgttgaagaagattttattgaaatcaccaacattatctgcaacttactgaaa
aatggaaaaagctatctcccagcagctcagttggaggtaaaaaaaataacaagtaaaaaa
agaaaagaatttagataa
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