Gemella sp. ND 6198: CG018_05550
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Entry
CG018_05550 CDS
T05584
Name
(GenBank) ATP-dependent helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
geq
Gemella sp. ND 6198
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geq03019
]
CG018_05550
03009 Ribosome biogenesis [BR:
geq03009
]
CG018_05550
Enzymes [BR:
geq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CG018_05550
Messenger RNA biogenesis [BR:
geq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CG018_05550
Ribosome biogenesis [BR:
geq03009
]
Prokaryotic type
rRNA helicases
CG018_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Flavi_DEAD
AAA_19
Cas3-like_C_2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AXI26898
LinkDB
All DBs
Position
1211040..1212371
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AA seq
443 aa
AA seq
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MLSKSFEQYGFKDFVNKAIIDLGFKNPTKIQERVFSPVLKEKNIVARSQTGSGKSHSFLL
PIFSKLDLDRKKTQSIILAPTRELSRQLYEMAVHIATFSEKEIKITLCIGGQDLNRDIER
VSNAPHIIIGTPTRVLELDRASALSIKEVETLVIDECDMMIDLGFMEDIDKLSKRAATNC
QFLVFSATIPTQMSYFLKKYLNNAQHIDVDNAKFGKINYILVPEKSSTRFEKLYEITTVL
NPYLALIFANKKTEVEEISNYLIKQGLNVGVLHGDLTPRERKQMQRRINNLDFTYVVASD
LMSRGIDIEGISHVINFNIPNDLDFFIHRAGRTGRAGLSGECITIYNSKDEEKLQILENR
GIKFNHVDIKNGQFIETKDRNKRQSRKKIVADHNLTEKLKSKVKVSKKVKPGYKKKYKYK
MDKLKQKERRKFAKRMNRTNRGN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaaaatcatttgaacaatatggatttaaagactttgtaaataaggcgataatt
gatttaggatttaaaaatccgacaaaaattcaggagagagtattttctccggtgttgaaa
gaaaaaaatattgtggcaaggtcacaaacaggtagtggaaaaagtcattcatttttattg
ccgatttttagtaagctggatttagataggaagaaaacacagagtattatcttggcaccg
acacgtgagttatcacgccagttatatgaaatggcagtgcatattgcaacatttagtgaa
aaagaaataaaaattactttgtgtatcgggggtcaagatttaaaccgtgatatagagcgt
gtatcgaatgcaccgcatattattatcggaacaccgacaagggttttagaattggataga
gccagtgctttatcgataaaagaagtagaaacgttggttattgatgaatgtgatatgatg
attgatttaggttttatggaagatatagataaattatctaaacgtgcagcaacaaattgt
caatttctagttttttctgcaactatcccaacacaaatgagttattttttaaaaaaatat
ttaaacaatgcacaacatattgatgtggataatgcaaaatttgggaaaataaactatata
ctagtaccagaaaaaagttctacacgttttgagaaattgtatgaaataacaacggtgctc
aatccatatttagctttgatttttgccaataaaaaaacagaagtagaggaaattagtaat
tatttaattaaacaaggacttaatgttggtgtgttgcatggtgatttaacaccacgtgag
agaaagcaaatgcaacgcagaattaataatttagattttacttatgtagttgctagtgat
ttaatgagccgaggtattgatatcgaaggaattagtcatgttattaattttaatattcct
aatgatttagacttttttattcacagagcaggtagaaccggtcgtgcagggttgagtgga
gaatgtattacgatttataacagtaaggatgaagaaaaactgcaaatattagaaaatcgt
ggtataaaatttaatcatgtagatattaaaaacggacaatttattgaaacaaaggataga
aacaaacgtcagagtagaaagaaaatagtagctgatcataatttaacggaaaaattaaaa
tcaaaagtaaaagtatcaaagaaagtaaaaccgggttataagaaaaaatataaatataaa
atggataaattaaaacaaaaagaacgcagaaaatttgcgaaaagaatgaataggacaaat
agaggtaattga
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