Gemella sp. ND 6198: CG018_05835
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Entry
CG018_05835 CDS
T05584
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
geq
Gemella sp. ND 6198
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geq03032
]
CG018_05835
03400 DNA repair and recombination proteins [BR:
geq03400
]
CG018_05835
Enzymes [BR:
geq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CG018_05835
DNA replication proteins [BR:
geq03032
]
Prokaryotic type
DNA Topoisomerases
CG018_05835
DNA repair and recombination proteins [BR:
geq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CG018_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Auto_anti-p27
Arc_PepC
DNA_ligase_ZBD
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AXI26950
UniProt:
A0AAD0PZ54
LinkDB
All DBs
Position
1280762..1282813
Genome browser
AA seq
683 aa
AA seq
DB search
MSENLVIVESPSKAKTIEKYLGKKYKVISSKGHVRDLPKSRMGVEVLDNGNVEVDYISIR
GKGDVIKSLKKEAKGKKVFLASDPDREGEAIAWHIAYILGLDNNEDNRIVFNEITKDAVK
EAIKHPRKINTDLVQSQQARRILDRLVGYNISPVLWKKVKPKLSAGRVQNAALKLIVDRE
EEILNFKPEEYWSMPIDFIKDRKILTANFYSYKGERIKLENKNIVDTIKKAIKGETFKVV
DVTKSKKNRNSPNIYITSTMQQDASRKLNFKTRKTMSVAQELYEGINLKKLGGVTGLITY
MRTDSTRVSDEAVASANNFILTNYGKEYILATAKSKKASKNVQDAHEGIRPTNIDYTPDI
IKDYLSKDQYKLYKLIWERFIASRMSAAVYEMNVTTFENNKVVYKGTHSNLIFNGFLAVL
KEKEKVKVAPKFEVGENAKIKEIKEEQHFTQPPARYSEAKLIATLEELGIGRPSTYATIV
ETLQKRYYVKLQNKVFTPTELGIIVSKITEQYFPDIINTQFTANLENQLDNIAEGKVTWE
KTISDFYSGFSKDVKKAEREMEKIEIKQEFTGENCPDCGAPLVYKLGKFGKFIACSNFPE
CRYTGTIQKKIGVTCPKCHNHDILEKKSKKGKVFYGCEGFPGCDFVSWDKPINRFCPKCN
NILYENKKGVTCANCDYIEEIKK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatttagttatagtcgaatctccttcaaaggcaaaaacgatagaaaaatat
ctaggaaaaaaatataaagtaatttcatcaaaaggacatgtcagagatttacccaaaagt
agaatgggagttgaagtattagacaatggaaatgttgaggttgactatatttctattcgt
ggtaaaggggatgttataaaaagtttgaaaaaagaagcaaaagggaaaaaagtattctta
gcttccgatcccgatagagaaggagaagcaatagcgtggcatattgcatatattttgggg
ttagataataatgaagataacagaatagtatttaatgaaataacaaaagatgcagtgaaa
gaggcaataaagcatccgagaaaaatcaatacagatttggttcaatcacagcaagcaaga
cgtattttagatagattggttggatataacatttctccggttttatggaaaaaggtaaaa
cctaaactgtcagccgggagagtacaaaatgcggcattgaaattaattgtagatagagaa
gaagaaatactaaatttcaaaccggaagaatattggtcaatgccgatagacttcataaaa
gatagaaagattcttactgcaaatttttattcatataaaggtgaaagaataaaattagaa
aataaaaacattgttgatactataaaaaaagcaataaaaggtgaaacttttaaagtagtt
gatgtgacaaaatctaagaaaaatagaaattctcctaatatttatattacatcaacaatg
caacaagatgcttcaagaaaattaaattttaaaaccagaaaaacaatgagtgttgctcaa
gagttgtatgagggtattaatttaaaaaaacttggtggggtaacggggcttatcacatac
atgagaaccgattctacacgtgtatcagatgaagcggtcgcaagtgcgaataattttatt
ttaaccaattacggaaaagaatatattttggctaccgctaaatcaaaaaaagcaagtaaa
aatgttcaagatgcacatgaaggtattagacctacaaatatagattatacgccagatata
ataaaagattacttatcaaaggatcaatataaattatataaacttatatgggaacgtttt
attgcaagtagaatgagtgcagctgtctatgaaatgaatgttacaacatttgagaataat
aaagttgtttataaaggcacacactctaatttgatatttaacggttttttagcggtatta
aaagaaaaagaaaaggtaaaagttgcaccgaagtttgaagtaggggaaaatgctaaaata
aaagaaataaaagaggaacaacattttactcaaccacctgcacgctattcagaagcaaaa
cttattgcaacattggaagaattaggtataggtagaccctcgacttatgcaacaatagta
gaaactttgcaaaaaagatactatgtaaaacttcaaaataaagtttttacaccaacagaa
ctgggaatcattgtcagcaagataacagaacaatattttccggatattattaatacacaa
tttaccgctaatttggaaaatcaacttgataatatagctgaaggaaaagtaacatgggaa
aaaactatttcggatttttattcaggatttagtaaagatgttaaaaaagctgaacgtgaa
atggaaaaaatagaaattaaacaggaatttacaggagaaaactgtcctgattgcggggca
ccgctagtttataaattagggaaattcggtaaatttatagcatgttccaactttccggaa
tgtagatatacaggaactatacagaaaaaaattggtgtaacctgtccgaaatgccataat
catgatattttggagaaaaaatcaaaaaaagggaaagtattttacggttgtgaaggtttt
ccgggatgtgattttgtatcatgggataaacctattaatagattctgcccaaaatgtaat
aacattttatatgaaaataaaaaaggtgtgacttgtgctaactgtgattatatagaagaa
ataaaaaaataa
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