Gemella sp. ND 6198: CG018_06805
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Entry
CG018_06805 CDS
T05584
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
geq
Gemella sp. ND 6198
Pathway
geq03420
Nucleotide excision repair
geq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
geq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CG018_06805
03430 Mismatch repair
CG018_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geq03400
]
CG018_06805
Enzymes [BR:
geq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CG018_06805
DNA repair and recombination proteins [BR:
geq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CG018_06805
MMR (mismatch excision repair)
Other MMR factors
CG018_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
ResIII
DUF3553
Motif
Other DBs
NCBI-ProteinID:
AXI27128
LinkDB
All DBs
Position
complement(1488656..1490839)
Genome browser
AA seq
727 aa
AA seq
DB search
MNLIQNMNNNQLKAILKTDGAVMVIAGAGSGKTRVLTNRIAYLISEKNVLESNILAITFT
NKAAKEMKERIYSLVGETAKFIWINTFHSMCVRILRKHIDLLGYNKTFTILDTGEQKTVI
KNIIKESNLPEDSYQPNSILKIISNAKNKMVTSKEMRETSKFGFMKNVAEIYCQYERYLK
KNSVLDFDDLMLKTIELFEKNKDILSIYQNKFEYIHVDEYQDTNVIQYKLIKMLTAIHKN
ICVVGDDDQSIYSWRGACSDNIINFEKDFDNIEIIFLDQNYRSNSIILDVANSVIKNNTD
RKEKALWSENKGGEKITVYAALNDRDETDDIAKKITELKLQGNSYKDIAILYRANYLSRS
LENSCVSFGIPYKLIGSLKFLQRQEIRDILSYMNVLVNPNDEFSLRRIINTPKRGIGASS
IEKIENYASENNISLFQALKEIENIKLSKKISTNVKLFIKLFDKYSQVEDYTIEELIIGI
YKDSGYESMLKESADVYAESRIENISELVSSAKQFSSMNDNLIDFISEMSLTSDSDDENE
DDAVTLSTVHAAKGLEYKVVFIMGLEENLFPSIRDADSSEDEKNKMEEERRLAYVAITRA
KEKLFMSYANRRMQFGNIKMNKRSRFLDEVPGNLVNFESSFGDLENTNDKIQSVNKFVSK
LSPKIKIDDKPKISAKSANYSVGDKVNHKKFGDGVVVEIKHDSVKVNFEEVGVKILLIEY
VKLTRKG
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttaattcaaaatatgaataataatcaactaaaagctattttaaaaacagatggt
gcagttatggttatagcaggagccggaagtggtaaaactagggtgcttactaaccgaata
gcatatttaatttcagaaaaaaatgtgttagaaagtaatattcttgctattacgtttaca
aataaagcggcaaaagaaatgaaagaaagaatttattcactagtaggagaaacggctaaa
tttatttggataaatacctttcactcaatgtgtgtacgtattctaaggaaacatattgat
ttattaggttataataagacatttacaatcttagataccggtgagcaaaaaactgtaata
aaaaatataatcaaagaatcaaatttaccggaagattcttatcaaccaaatagcatatta
aaaattatttctaatgcaaaaaataaaatggttacctctaaagaaatgagagaaacatca
aaattcggatttatgaaaaatgtagcagaaatatattgtcaatatgaaagatatttgaaa
aaaaatagtgttttagattttgatgatttaatgctgaaaactatagaattatttgaaaaa
aataaagatatattaagtatttaccaaaataaattcgaatacatccatgttgatgaatat
caagataccaatgtaatacaatataagttaataaagatgttaacagcgattcataaaaat
atttgtgttgttggagatgatgatcaaagtatttacagttggcgtggtgcgtgtagtgat
aatattataaattttgaaaaagattttgataatatagaaattatttttttagatcaaaat
tatcgttcaaattcgataatattagatgtagcaaattcagttattaaaaacaatactgat
agaaaagaaaaggcactctggtctgagaataagggcggcgaaaaaataacagtttatgct
gcattaaatgatagagatgaaaccgatgatattgctaagaaaatcacagagttaaaactt
caaggaaattcatataaagatatagcaatactgtatcgagcaaactatctgtctcgttct
ttagaaaactcttgtgtatcattcggtataccgtacaagctgattggttcattaaaattc
ttacaacgacaagaaattagagatatattatcttacatgaatgttttggtaaacccaaat
gatgaatttagtctaagaagaattattaatacccctaaacgtggtataggtgccagttcc
atagaaaaaatagaaaattatgctagtgagaacaatatttcattatttcaagcgcttaaa
gaaattgaaaatataaaactttctaagaaaatatctacaaatgttaagttgtttataaaa
ctgtttgataaatattcgcaagtagaagattataccattgaagagttaattataggaatt
tataaagattcaggatatgaaagtatgttaaaagaatctgctgatgtctatgctgaaagt
agaatagaaaacatttcagaattagtatcatcagcaaaacagttttcaagtatgaatgac
aatttaattgattttatttctgaaatgtcgcttacttctgattctgatgatgaaaatgaa
gatgatgctgtaacattatctacagttcatgcagctaaaggtcttgagtataaagtggta
tttattatgggacttgaggaaaatctttttccttctattcgtgatgccgatagttcagaa
gatgaaaaaaataaaatggaagaagaaagacgcttagcttatgtagctataactcgagca
aaagaaaaattatttatgtcatatgccaataggcgtatgcaatttggtaatataaaaatg
aataaacgctccagatttttagatgaagttcccggtaatttagtgaactttgaatcatcg
tttggagatttggaaaacactaatgataaaatacaaagtgtaaataaatttgtaagtaaa
cttagtccaaaaataaaaattgatgacaagccaaaaattagtgccaaaagtgcgaattat
tccgttggcgataaggttaatcataaaaaatttggagatggtgtagtggtagaaataaaa
catgatagtgttaaagtgaatttcgaagaagttggggttaagatacttcttatagaatat
gtgaagttgacaagaaagggataa
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