Geomonas oryzisoli: KP004_01080
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Entry
KP004_01080 CDS
T07282
Name
(GenBank) outer membrane beta-barrel domain-containing protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ger
Geomonas oryzisoli
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ger02000
]
KP004_01080
Transporters [BR:
ger02000
]
Other transporters
Pores ion channels [TC:
1
]
KP004_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
QWV93816
LinkDB
All DBs
Position
240761..242143
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AA seq
460 aa
AA seq
DB search
MKKYLLLLVLVPALLFTLLPQARAEIKAQSFSLSPFVGGYTFIGKEHLETAPAFGVRGGY
NLTQHFGLEAVFDYVPTEGKRNSNIGDLDAYNYHLDMLYHFLPDRQLVPYVAAGYGGQSR
EAKGNFETSRPAFNYGVGLKYFLTDALALRGDLRHLILREDGESFHNLEYSVGVDFVFGG
VKAAPAVAAKPEPAPPAPAPAEEPPLEPVPAAEPTPGHYKYCVTLHGEFDIDKAAIRQED
KDQIGVVCEFMKQYPTTTAVIEGHTDNVGAPEYNLGLSKRRAEAVVDYMVASCGIDRSRL
EARGFGMARPVASNATDEGRQANRRIEAIIDCAFDVKEVKPPERLCMALVVEFDTGKANI
KPQYKDEMAKVADYMKKYPTTTAVIEGHTDNVGGYEYNMKLSRERAESAVQYLVDNFGIE
KSRLAAKGYGYTRRIAYNSTAEGRAKNRRINAIIDCVVTK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtacctgctgttgcttgttctggttccagcactgttgttcaccctgctcccg
caggcacgcgccgaaatcaaggcgcaaagcttctccctctcaccctttgtcggcggctac
accttcatcggcaaggaacacctggagaccgcgccggccttcggggtgcgcggcggctac
aacctcacccagcacttcggactcgaagccgtgttcgactacgttcccaccgaaggaaag
cggaacagcaacatcggcgacctcgatgcctacaactaccacctcgacatgctttatcac
ttccttccggaccggcagctggttccctacgtcgccgccggctacggcggacagtcccgc
gaagcgaagggaaacttcgagaccagcaggcccgctttcaattacggtgtcggcttgaaa
tacttcctcaccgatgcgctggccttgcgcggcgatctgaggcacctgatcctgagggaa
gacggcgagtcgttccacaacctggagtacagcgtcggcgttgatttcgtattcggcggc
gttaaagcggcacctgcagttgcggccaaaccggaaccggcaccgccggcaccggcacct
gccgaggaaccgccgctggagccggtgcctgcggctgagccgaccccgggtcactacaag
tactgcgtcactctgcacggcgagttcgacattgacaaggcggccatccgtcaggaggac
aaggatcagatcggtgtggtctgcgagttcatgaagcagtatccgaccaccaccgccgtg
atcgaggggcacaccgacaacgtgggagcacccgagtacaacctcggcctctccaagcgt
cgcgccgaggccgtagtcgactacatggtcgccagctgcggcatcgaccgctcccgtctc
gaggcgcgcggcttcggcatggcgcgccccgtggcgtccaacgccaccgacgaggggcgg
caggcgaaccgtcgtatcgaggcgatcatcgactgtgccttcgacgtgaaggaggtcaag
cctcccgagcgtctgtgcatggcgctggtggtcgaattcgacaccggcaaggcgaacatc
aagccgcagtacaaggatgaaatggcgaaggtagccgactacatgaagaaatacccgacc
accaccgcggtcatcgaagggcataccgataacgtcggcgggtacgagtacaacatgaag
ctgtcgcgggagcgcgccgagagcgcggtgcagtacctggtcgacaacttcggcatcgag
aagagccgcctcgccgccaaaggttacggctacaccaggcgtatcgcctataacagcacc
gccgaaggccgcgccaagaaccgcaggatcaacgccatcatcgactgcgtggttactaaa
tag
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